Table 4 Cross platform correlation coefficients. Pearson correlation coefficients are given for each platform pair and cell line, calculated over the genes common to all platforms. Values were obtained from scatter plots as shown in Figure 2a-c.
From: Three microarray platforms: an analysis of their concordance in profiling gene expression
Platform | Jurkat | L428 | SUDHL | OCI-Ly3 | LNCaP | MCF10A | Median |
|---|---|---|---|---|---|---|---|
Incyte/Operon | 0.727 | 0.707 | 0.708 | 0.724 | 0.710 | 0.708 | 0.709 |
Incyte/Affy | 0.767 | 0.777 | 0.781 | 0.780 | 0.741 | 0.744 | 0.772 |
Operon/Affy | 0.813 | 0.784 | 0.783 | 0.790 | 0.796 | 0.782 | 0.787 |