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Table 1 Summary of data collection

From: A study of inter-lab and inter-platform agreement of DNA microarray data

Data Set Array Genes Sample Replicates Data type Platform Lab Data Source
KC CI 15K cDNA 15K Clonetech 4 Raw intensity cDNA Keck In house
KAV Affymetrix 430A 23K Clonetech 2 AV(Bioconductor) Affymetrix Keck In house
KLW Affymetrix 430A 23K Clonetech 2 Li and Wong Affymetrix Keck In house
KRMA Affymetrix 430A 23K Clonetech 2 RMA Affymetrix Keck In house
CC Riken16K cDNA by Agilent 16K Clonetech 3 Raw intensity cDNA Cal Tech NCBI GEO
CO Riken16K Oligo by Agilent 16K Clonetech 3 Raw intensity Oligo Cal Tech NCBI GEO
GNF Affymetrix U74Av2 12K In house 2 AV(MAS4.0) Affymetrix GNF expression.gnf.org