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Table 2 Codon Usage in the A. tamarense ESTs.

From: Insights into a dinoflagellate genome through expressed sequence tag analysis

TTT F

703

23.1%

TCT S

482

10.0%

TAT Y

372

18.8%

TGT C

251

15.6%

TTC F

2335

76.9%

TCC S

1348

27.9%

TAC Y

1612

81.2%

TGC C

1356

84.4%

TTA L

61

0.9%

TCA S

413

8.6%

TAA *

29

5.6%

TGA *

411

79.8%

TTG L

1118

15.7%

TCG S

926

19.2%

TAG *

75

14.6%

TGG W

1051

100.0%

CTT L

902

12.7%

CCT P

751

17.6%

CAT H

464

25.7%

CGT R

475

9.6%

CTC L

2296

32.3%

CCC P

1382

32.4%

CAC H

1340

74.1%

CGC R

1779

35.8%

CTA L

139

2.0%

CCA P

829

19.4%

CAA Q

433

14.6%

CGA R

426

8.6%

CTG L

2596

36.5%

CCG P

1307

30.6%

CAG Q

2535

85.4%

CGG R

1128

22.7%

ATT I

715

19.1%

ACT T

542

13.1%

AAT N

508

21.0%

AGT S

344

7.1%

ATC I

2770

74.1%

ACC T

1442

34.9%

AAC N

1915

79.0%

AGC S

1310

27.2%

ATA I

253

6.8%

ACA T

638

15.4%

AAA K

415

8.5%

AGA R

253

5.1%

ATG M

2096

100.0%

ACG T

1510

36.5%

AAG K

4485

91.5%

AGG R

910

18.3%

GTT V

686

11.2%

GCT A

1195

15.2%

GAT D

1117

24.9%

GGT G

943

13.8%

GTC V

2214

37.8%

GCC A

2899

36.8%

GAC D

3371

75.1%

GGC G

3957

58.1%

GTA V

268

4.6%

GCA A

1559

19.8%

GAA E

750

13.8%

GGA G

767

11.3%

GTG V

2694

46.0%

GCG A

2218

28.2%

GAG E

4682

86.2%

GGG G

1142

16.8%

  1. Analysis is of 515 proteins (81,893 codons). Third position nucleotide usage was T = 12.8%, A = 9.3%, C = 40.7%, G = 37.2%. The asterisk (*) indicates a stop codon.