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Table 2 Signature Proteins specific for Alpha-proteobacteria, except Rickettsiales.a

From: Signature proteins that are distinctive of alpha proteobacteria

Protein CC1211 [16125461] CC1886 [16126129] CC2245 [16126484] CC3470 [16127700] CC0520b [16124775]
Length 167 223 190 253 284
Mag. mag. 3e-19 (1.09) - 3e-16 (0.96) 5e-23 (0.97) 2e-38 (0.89)
Rhod. rubr. 3e-17 (0.73) 1e-07 (0.73) 3e-22 (0.64) 5e-04 (0.82) 2e-36 (0.93)
Nov. aro. 9e-13 (1.41) 3e-05 (0.91) 7e-13 (1.24) 6e-20 (0.84) -
Z. mobilis 8e-12 (1.38) - 5e-12 (1.21) 1e-15 (0.82) -
C. cres. 5e-93 (1.00) 3e-58 (1.00) 1e-75 (1.00) e-115 (1.00) e-146 (1.00)
Sil. pom. 9e-21 (1.19) 2e-04 (0.53 7e-16 (1.04) 2e-10 (0.78) 5e-27 (0.88)
Sil. sp. 8e-20 (1.17) 5e-07 (0.65) 1e-15 (1.03) 3e-07 (0.78) 1e-27 (0.87)
Rh. spha. 1e-19 (1.24) 2e-06 (0.55) 2e-16 (1.09) 8e-07 (0.78) 2e-30 (0.92)
Bra. jap. 4e-20 (1.01) 1e-10 (1.61) 1e-25 (0.89) 5e-17 (0.94) 2e-44 (0.87)
Rho. pal. 1e-18 (1.28) 5e-10 (1.48) 3e-25 (1.12) 2e-17 (0.86) 5e-45 (0.91)
Agr. tum. - 2e-10 (0.65) - 1e-15 (0.85) 8e-46 (1.01)
Sino. meli. 1e-19 (1.04) 3e-12 (0.67) 4e-25 (0.91) 7e-16 (0.87) 1e-45 (0.89)
Bru. mel. 4e-22 (1.11) 2e-10 (0.68) 1e-26 (0.97) 1e-18 (0.82) 2e-41 (1.08)
Bru. suis 4e-22 (1.08) 2e-10 (0.70) 5e-26 (0.95) 8e-18 (0.83) 1e-41 (0.91)
Meso. loti 4e-24 (1.02) 5e-09 (0.89) 1e-27 (0.90) 8e-21 (0.83) 1e-44 (0.92)
Meso. sp. 1e-21 (1.07) 2e-10 (0.55) 5e-25 (0.94) 1e-18 (0.83) 1e-42 (0.91)
B. henselae 6e-20 (1.06) 9e-14 (0.63) 9e-22 (0.93) 5e-15 (0.84) 1e-28 (0.86)
B. quintana 2e-19 (1.06) 3e-12 (0.63) 3e-22 (0.93) 2e-11 (0.84) 2e-27 (0.89)
Non Alpha Kin. radio. 0.097 (3.89) Vib. para. 7.7 (0.82) Pse. aeruginosa 4.2 (1.88) Vib. cholerae 0.035 (1.96) Polaromonas sp. 0.003 (0.95)
Protein CC0365 [16124620] CC0366c [16124621] CC1977d [16126220] CC3010e [16127240] CC0100 [16124355]
Length 169 177 241 216 576
Mag. mag. 2e-06 (1.05) 2e-06 (0.93) 1e-32 (0.98) 4e-24 (0.90) 7e-34 (0.92)
Rhod. rubr. 2e-08 (1.08) 4e-06 (0.91) 2e-36 (1.07) 8e-18 (0.94) -
Nov. aro. 3e-07 (1.09) 3e-05 (0.93) 5e-29 (0.95) 3e-13 (0.91) 5e-26 (1.09)
Z. mobilis - - 1e-35 (0.97) 6e-12 (0.96) 2e-35 (1.02)
C. cres. 1e-44 (1.00) 1e-44 (1.00) e-111 (1.00) 6e-93 (1.00) 0.0 (1.00)
Sil. pom. 4e-09 (1.12) 1e-07 (1.02) 2e-40 (0.99) 1e-19 (0.95) 2e-34 (0.99)
Sil. sp. 4e-08 (1.09) 1e-11 (1.02) 6e-38 (0.97) 2e-18 (0.96) 1e-33 (1.00)
Rh. spha. 1e-06 (1.09) 1e-08 (0.90) 6e-36 (0.98) 2e-20 (0.98) 7e-30 (0.98)
Bra. jap. 8e-07 (0.95) 2e-12 (1.06) 1e-28 (1.10) 8e-20 (0.94) 3e-35 (1.02)
Rho. pal. 9e-06 (0.96) 9e-10 (1.05) 2e-33 (1.08) 2e-19 (0.99) 5e-35 (1.09)
Agr. tum. 1e-06 (0.95) 7e-10 (1.21) 2e-35 (1.10) 3e-20 (0.98) 8e-35 (0.98)
Sino. meli. 2e-08 (0.95) 4e-10 (1.15) 3e-38 (1.08) 2e-20 (0.84) 2e-31 (0.94)
Bru. mel. 0.002 (0.84) 1e-10 (1.02) 1e-32 (1.08) 4e-20 (0.97) 4e-36 (0.99)
Bru. suis 2e-07 (0.94) 1e-10 (1.18) 8e-33 (1.08) 4e-20 (0.97) 5e-36 (0.94)
Meso. loti 1e-08 (0.96) 8e-08 (1.09) - 5e-22 (0.95) 2e-34 (0.92)
Meso. sp. 7e-11 (0.94) 5e-11 (1.09) 1e-27 (1.09) 6e-23 (0.95) 1e-34 (0.99)
B. henselae 1e-06 (0.97) 3e-08 (1.06) 1e-27 (1.08) 2e-20 (0.95) 2e-27 (0.99)
B. quintana 5e-07 (0.97) 1e-07 (1.06) 2e-29 (1.08) 2e-20 (0.94) 4e-30 (0.99)
Non-Alpha Myc. galli. 1.1 (1.17) Rhodo. baltica 0.005 (1.47) M. thermo. 0.28 (1.03) Syn. elongatus 0.002 (1.33) Coryn. efficiens 0.11 (0.52)
  1. a Abbreviations and other details regarding BLAST results can be found in Table 1. E values of 0.0 indicate an extremely high degree of similarity between protein sequences. Additional abbreviations: Coryn., Corynebacterium; Kin. radio., Kineococcus radiotolerans; M. thermo., Moorella thermoacetica; Myc. galli., Mycoplasma gallisepticum; Pse., Pseudomonas; Rhodo., Rhodopirellula; Syn., Synechococcus; Vib. para., Vibrio parahaemolyticus.
  2. b,c Magnetococcus sp. MC-1 (unclassified) contains homologues of both proteins with E values of 1e-18 [48832519] and 8e-06 [48833234] respectively.
  3. d Protein also found in Eukaryotes with examples from representative species as follows: Homo sapiens; 1e-22 [21735485], Oryza sativa; 2e-18 [50939575] and Cryptococcus neoformans; 3e-17 [57225838].
  4. e One BLAST hit is Pseudomonas sp. with E value of 8e-20 [94976].