Skip to main content

Table 1 List of the PCR primers used.

From: Colour variation in red grapevines (Vitis vinifera L.): genomic organisation, expression of flavonoid 3'-hydroxylase, flavonoid 3',5'-hydroxylase genes and related metabolite profiling of red cyanidin-/blue delphinidin-based anthocyanins in berry skin

Target DNA

Name

5'→3' sequencea

Plant F3'H

F3'H_S

CCIGTIAANYTNGGNCARYTIBTIAA

Plant F3'H

F3'H_AS

GCICKYTGIARIGTNARNCCRTA

Plant F3'5'H

F3'5'H_S

ATGCTGACNTAYGCIATGGCNAAYATG

Plant F3'5'H

F3'5'H_AS

CGAARTCRTTICCYCKNGGNTCDATYTT

Grape F3'H

VvF3'H_S

ATTCGCCACCCTGAAATGAT

Grape F3'H

VvF3'H-indel_S

CAACAAGAGCTGGACGCAGT

Grape F3'H

VvF3'H_AS

AGCCGTTGATCTCACAGCTC

Grape F3'5'H

Vv3'5'H-1A_S

GAAGTTCGACTGGTTATTAACAAAGAT

Grape F3'5'H

VvF3'5'H-1A_AS

AGGAGGAGTGCTTTAATGTTGGTA

Grape F3'5'H

Vv3'5'H-2A_S

AAGAAGTTCGACAAGTTATTGACAAG

Grape F3'5'H

Vv3'5'H-2A_AS

AGCGCCTTAATGTTGGTAAGG

Grape F3'H

VvF3'H-intron_S

CGTTGATCTCGCTGAAGGAT

Grape F3'H

VvF3'H-intron_AS

ATCATTTCAGGGTGGCGAAT

Grape F3'5'H

Vv3'5'H-1A-intron_S

GCTCACTATTACCAACATTAAAGCA

Grape F3'5'H

Vv3'5'H-2A-intron_S

AAGCTCACCCTTACCAACATTAAG

Grape F3'5'H

Vv3'5'H-intron_AS

GGCAAGTCAGACTCCACGAG

BES38C24-FM

38C24-FM_S

TGGCCTTCATTTTGGTTAGC

BES38C24-FM

38C24-FM_AS

TCATCACTCAGGGCACAAAA

BES38C24-RM

38C24-RM_S

TTACCGCCCTTGTCCTTGTA

BES38C24-RM

38C24-RM_AS

GCGTATTGATCATCCCTTGG

BES17K4-FM

17K4-FM_S

CCAATATGTGGAGGAGGAACA

BES17K4-FM

17K4-FM_AS

CATCCAGGTTGTGAAGGACA

BES9C17-FM

9C17-FM_S

AGGAGGCCTATGCATCAGAA

BES9C17-FM

9C17-FM_AS

GGAGCACCATTAAAGGCAAA

BES40A22-FM

40A22-FM_S

CTAATGGGCATCAGGTTTCG

BES40A22-FM

40A22-FM_AS

CGTGCATATCATTTTCTTCCAA

BES5A23-FM

5A23-FM_S

TTCAAGAAGTGGAGGCTGCT

BES5A23-FM

5A23-FM_AS

AGCACTGACTGCCTGATCCT

  1. a Degenerate IUB code: I = inosine; R = A or G; M = A or C; W = A or T; Y = C or T; S = C or G; D = A, G or T; N, A, C, G or T.