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Table 1 Statistics of single domains. Domains in the underlying interaction network are characterized according to their degree k and their strength s, defined as the sum of all weights the domain in question is involved in. Here, we show the 10 most connected and strongest PFAM domains.

From: Topology and weights in a protein domain interaction network – a novel way to predict protein interactions

PFAM domain

description

degree k

PFAM domain

description

strength s

PF01423

LSM

72

PF01423

LSM

777.7

PF00071

ras

50

PF00118

TCP-1/cpn60

294.5

PF00022

actin

50

PF00022

actin

291.5

PF00069

pkinase

49

PF00069

pkinase

289.0

PF00076

rrm1

45

PF00071

ras

263.5

PF00118

TCP-1/cpn60

43

PF00076

rrm1

253.4

PF00096

zf-C2H2

39

PB075870

248.8

PB075780

39

PF00227

proteasome

237.1

PF00036

efhand

36

PF01008

IF-2B

226.5

PF01008

IF-2B

35

PF00001

7tm-1

226.0