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Table 1 Occurrence of cell-surface clusters and genes in genomes

From: Lactobacillus plantarum gene clusters encoding putative cell-surface protein complexes for carbohydrate utilization are conserved in specific gram-positive bacteria

  

genes#

Species

clusters

cscA

cscB

cscC

cscD

Complete genome sequences

Lactobacillus plantarum WCFS1

9

9

13

8

6

Lactobacillus sakei 23K

8

10*

8

6*

2

Enterococcus faecalis V583

6

7

17

4

5

Lactococcus lactis IL1403

3

4 *

6

2

3

Listeria innocua Clip11262

3

4

3

3

2

Listeria monocytogenes EGD-e

2

2

2

2

1

Bacillus cereus ZK

1

1

2

1

1

Bacillus anthracis A2012 (plasmid)

1

1*

1

1

0

Incomplete genome sequences

Lactococcus cremoris SK11

5

5 *

7

3

3

Lactobacillus casei ATCC367

4

5*

5*

3*

3

Enterococcus faecium DO

3

4

3 *

3

1

Pediococcus pentosaceus ATCC25745

2

2

2

1

1

Leuconostoc mesenteroides ATCC8293

1

1

1

1

1

Oenococcus oeni PSU-1

1

1 *

1

0

0

Bacillus thuringiensis ATCC35646

1

1

2

1

1

Lactobacillus brevis ATCC367

?

0

1

6

0

Total

50

57

74

45

30

  1. # Seven of these csc genes are found outside the gene clusters in complete genomes (details in additional file 1).
  2. * Some genes contain frame shifts, stop codons or truncations (details in additional file 2).