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Table 5 Contigs containing at least 5 ESTs that are unique to the FGAS dataset.

From: Wheat EST resources for functional genomics of abiotic stress

Contig name

Annotation

Number of ESTs

Reference

CL1638Contig1

No Gene Ontology Hit (no homology)

24

[76]

CL1293Contig2

Wheat cold acclimation protein Wcor80 (Wcs120 homolog, manual annotation)

19

[65]

CL386Contig3

Chitinase 1

18

[31]

CL347Contig3

Cold acclimation protein WCS120 (manual annotation)

17

[65]

CL2466Contig1

Putative heat shock protein (E. Coli contaminant, manual annotation)

16

 

CL3394Contig1

Nitrogen regulation protein NR(II) (EC 2.7.3.-) (E. coli contaminant, manual annotation)

12

 

CL7Contig23

Aquaporin PIP1

 

[77]

CL40Contig14

Chitinase IV

11

[31]

CL650Contig3

Chloroplast-targeted COR protein (Wcor14c, manual annotation)

 

[76]

CL1239Contig3

Putative LMW heat shock protein

10

 

CL2570Contig1

Hypothetical protein OJ1015F07.4

  

CL125Contig7

O-methyltransferase

9

[75]

CL206Contig11

Low molecular mass early light-inducible protein HV90, chloroplast precursor (ELIP)

 

[60]

CL3635Contig1

No Gene Ontology Hit

  

CL4047Contig1

ABA responsive protein mRNA (manual annotation)

 

[78]

CL52Contig12

No Gene Ontology Hit

  

CL52Contig13

No Gene Ontology Hit

  

CL619Contig5

WSI76 protein induced by water stress (galactinol synthase, manual annotation)

 

[79]

CL1228Contig3

Leaf senescence protein-like

8

 

CL1293Contig1

Dehydrin (Wcs120 homolog, manual annotation)

 

[65]

CL2543Contig2

No Gene Ontology Hit

  

CL400Contig4

Cysteine protease

 

[80]

CL4107Contig1

No Gene Ontology Hit

  

CL4776Contig1

Probable arylsulfatase activating protein aslB (E. coli contaminant, manual annotation)

  

CL1051Contig5

C repeat-binding factor 2

7

[81]

CL2204Contig1

No Gene Ontology Hit (Wheat Ice recristallization inhibitor, manual annotation)

 

[32]

CL3474Contig1

No Gene Ontology Hit

  

CL3792Contig1

No Gene Ontology Hit

  

CL4454Contig1

No Gene Ontology Hit

  

CL5468Contig1

Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.-) (E. coli contaminant, manual annotation)

  

CL833Contig4

Putative EREBP-like protein (putative AP2 domain transcription factor, manual annotation)

  

CL1318Contig2

S-like Rnase

6

[82]

CL1368Contig4

Beta-expansin

  

CL17Contig3

Type 1 non-specific lipid transfer protein precursor (Fragment)

 

[83]

CL20Contig27

No Gene Ontology Hit

  

CL2425Contig2

Putative lectin

 

[84]

CL280Contig2

Low temperature responsive barley gene blt14 (manual annotation)

 

[62]

CL280Contig4

Cold regulated protein pao29 (similar to blt14 manual annotation)

 

[62]

CL2910Contig1

CONSTANS-like protein CO6

  

CL3212Contig2

No Gene Ontology Hit

  

CL3324Contig2

RING zinc finger protein-like

  

CL3647Contig2

No Gene Ontology Hit

  

CL3778Contig2

Putative phenylalanyl-tRNA synthetase alpha chain

  

CL4292Contig1

C2H2 Zinc finger protein (manual annotation)

  

CL4895Contig1

No Gene Ontology Hit

  

CL5228Contig1

Putative inositol-(1,4,5) trisphosphate 3-kinase

  

CL5712Contig1

Putative ABCF-type protein (anthocyanin transport)

  

CL5985Contig1

Hypothetical protein P0508B05.10

  

CL6056Contig1

Putative calcium binding EF-hand protein (caleosin: lipid body trafficking, manual annotation)

  

CL6257Contig1

No Gene Ontology Hit

  

CL6493Contig1

No Gene Ontology Hit

  

CL861Contig2

No Gene Ontology Hit

  

CL1051Contig2

C repeat-binding factor 2

5

[81]

CL1182Contig3

OSJNBa0043A12.18 protein (putative transcription factor)

  

CL1279Contig2

Isoflavone reductase homolog (EC 1.3.1.-)

  

CL1366Contig3

Putative UDP-glucose: flavonoid 7-O-glucosyltransferase

  

CL206Contig6

High molecular mass early light-inducible protein HV58, chloroplast precursor (ELIP)

 

[60]

CL3647Contig1

No Gene Ontology Hit

  

CL4058Contig1

Myb-related protein Hv33

  

CL411Contig7

No Gene Ontology Hit (Wheat Ice recristallization inhibitor, manual annotation)

 

[32]

CL4350Contig2

Similarity to protein kinase

 

GenBank AY738149

CL4537Contig1

Putative ACT domain-containing protein

  

CL4642Contig1

Chitinase 1

 

[31]

CL4666Contig1

Farnesylated protein 1

 

[85]

CL4825Contig1

Hypothetical protein P0473D02.6 (Hypothetical protein OJ1368_G08.21)

  

CL6137Contig1

No Gene Ontology Hit

  

CL6258Contig1

Putative sodium-dicarboxylate cotransporter

  

CL6567Contig1

Putative arabinogalactan protein

  

CL6634Contig1

No Gene Ontology Hit

  

CL6741Contig1

Putative b-keto acyl reductase (fatty acid elongase, waxes biosyntheisis)

  

CL6821Contig1

Putative strictosidine synthase (alkaloid biosynthesis)

  

CL7090Contig1

No Gene Ontology Hit

  

CL721Contig3

No Gene Ontology Hit

  

CL7241Contig1

No Gene Ontology Hit

  

CL7243Contig1

No Gene Ontology Hit

  

CL7272Contig1

Early light-inducible protein

 

[60]

CL7415Contig1

No Gene Ontology Hit

  

CL7455Contig1

ABC1 family protein-like

  

CL754Contig3

Chitinase 3

 

[31]

CL7581Contig1

Aspartate transaminase, mitochondrial

  

CL7608Contig1

Putative aspartic proteinase nepenthesin I

  

CL7617Contig1

No Gene Ontology Hit (barley Blt14 homolog, manual annotation)

 

[62]

CL7686Contig1

No Gene Ontology Hit

  

CL7701Contig1

Putative FH protein interacting protein FIP2 (potassium channel tetramerization)

  

CL7785Contig1

No Gene Ontology Hit

  

CL7794Contig1

No Gene Ontology Hit

  

CL807Contig3

Putative diphosphonucleotide phosphatase (calcineurin-like phosphoesterase)

  

CL861Contig5

No Gene Ontology Hit

  

CL963Contig4

OSJNBb0013O03.11 protein (bHLH transcription factor, manual annotation)

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