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Table 2 Cross-platform behavior of selected probesets that detect the same transcript in the reference RNA.

From: Identical probes on different high-density oligonucleotide microarrays can produce different measurements of gene expression

Transcript Probe ID Ra Plus chip range A chip range T-Test
    Max. Min. Max. Min.  
Adducin 3 (gamma) 201752_s_at 1 2317.2 1848.2 2714.6 2447.2 0.001
  201034_at 0.812 4713.7 3574 3949.1 3173.8 0.217
  201753_s_at 0.812 3723 2001.4 2015.5 1619.9 0.096
  205882_x_at 0.976 2054.1 1709.2 2275.5 1748.1 0.622
dimethylarginine dimethylaminohydrolase 2 202262_x_at 1 674 548.4 1040 745.2 0.001
  214909_s_at 0.889 744.8 428.4 707.6 543.3 0.994
KIAA0676 protein 206431_x_at 1 973 797.3 1329.1 1049.4 0.002
  212054_x_at 0.906 1115.7 749.5 1235.7 1052.3 0.041
  215994_x_at 0.925 1407.2 841.8 1570.2 1339.6 0.048
  212052_s_at 0.811 1685.6 1423.5 1397 1175.3 0.003
Lysosomal-associated multi-spanning membrane protein-5 201721_s_at 1 2944.9 2612 4151 3491.3 0.000
  201720_s_at 0.919 1768.6 1273.4 1531.3 1194.1 0.378
nuclear transcription factor Y, gamma 202216_x_at 1 792.9 586.3 1033.5 839.8 0.006
  211251_x_at 0.962 813.8 618.9 1070 885.3 0.001
  202215_s_at 0.639 861.6 319.3 798.2 512 0.887
  211797_s_at 0.761 672.2 428.9 864.9 541.3 0.237
polyglutamine binding protein 1 214527_s_at 1 1808.6 1378.3 2290.6 1868.9 0.006
  207769_s_at 0.907 1682.5 1505 1579 1280.6 0.02
Putative prostate cancer tumor suppressor 209228_x_at 1 1610.8 1375.8 2304.3 1875.1 0.001
  213423_x_at 0.916 2664.5 2295 2236.3 1600.9 0.033
ribosomal protein, large, P0 201033_x_at 1 53465.1 34223.5 67507 55973.4 0.014
  208856_x_at 0.967 56980.3 36192.7 63815.1 55584.1 0.136
  211720_x_at 0.927 53420.1 37636.2 66827.6 52346.1 0.021
  211972_x_at 0.792 50538.4 32930.5 56212.5 48139.1 0.051
staufen, RNA binding protein (Drosophila) 213037_x_at 1 6121.4 5809 6947.7 6309.3 0.002
  207320_x_at 0.945 6664.7 5179.8 7435.3 5183.5 0.5
  208948_s_at 0.854 5936.5 4774.2 5292.5 4762.6 0.256
sulfotransferase (SULT1A3) 209607_x_at 1 1798.6 1595.5 2015.2 1866 0.001
  210580_x_at 0.951 2497.1 1768.8 2435.6 2173.4 0.164
U2 small nuclear RNA auxiliary factor 1-like 2 208174_x_at 1 677.9 529 866.7 779.8 0.001
  213876_x_at 0.935 792.5 583.8 738.7 652.4 0.91
  1. aR = the correlation coefficient between the 1st probeset of each group and the indicated probeset across 210 U133A arrays representing more than 70 cell and tissue types.