Table 2 Cross-platform behavior of selected probesets that detect the same transcript in the reference RNA.
Transcript | Probe ID | Ra | Plus chip range | A chip range | T-Test | ||
|---|---|---|---|---|---|---|---|
| Â | Â | Â | Max. | Min. | Max. | Min. | Â |
Adducin 3 (gamma) | 201752_s_at | 1 | 2317.2 | 1848.2 | 2714.6 | 2447.2 | 0.001 |
| Â | 201034_at | 0.812 | 4713.7 | 3574 | 3949.1 | 3173.8 | 0.217 |
| Â | 201753_s_at | 0.812 | 3723 | 2001.4 | 2015.5 | 1619.9 | 0.096 |
| Â | 205882_x_at | 0.976 | 2054.1 | 1709.2 | 2275.5 | 1748.1 | 0.622 |
dimethylarginine dimethylaminohydrolase 2 | 202262_x_at | 1 | 674 | 548.4 | 1040 | 745.2 | 0.001 |
| Â | 214909_s_at | 0.889 | 744.8 | 428.4 | 707.6 | 543.3 | 0.994 |
KIAA0676 protein | 206431_x_at | 1 | 973 | 797.3 | 1329.1 | 1049.4 | 0.002 |
| Â | 212054_x_at | 0.906 | 1115.7 | 749.5 | 1235.7 | 1052.3 | 0.041 |
| Â | 215994_x_at | 0.925 | 1407.2 | 841.8 | 1570.2 | 1339.6 | 0.048 |
| Â | 212052_s_at | 0.811 | 1685.6 | 1423.5 | 1397 | 1175.3 | 0.003 |
Lysosomal-associated multi-spanning membrane protein-5 | 201721_s_at | 1 | 2944.9 | 2612 | 4151 | 3491.3 | 0.000 |
| Â | 201720_s_at | 0.919 | 1768.6 | 1273.4 | 1531.3 | 1194.1 | 0.378 |
nuclear transcription factor Y, gamma | 202216_x_at | 1 | 792.9 | 586.3 | 1033.5 | 839.8 | 0.006 |
| Â | 211251_x_at | 0.962 | 813.8 | 618.9 | 1070 | 885.3 | 0.001 |
| Â | 202215_s_at | 0.639 | 861.6 | 319.3 | 798.2 | 512 | 0.887 |
| Â | 211797_s_at | 0.761 | 672.2 | 428.9 | 864.9 | 541.3 | 0.237 |
polyglutamine binding protein 1 | 214527_s_at | 1 | 1808.6 | 1378.3 | 2290.6 | 1868.9 | 0.006 |
| Â | 207769_s_at | 0.907 | 1682.5 | 1505 | 1579 | 1280.6 | 0.02 |
Putative prostate cancer tumor suppressor | 209228_x_at | 1 | 1610.8 | 1375.8 | 2304.3 | 1875.1 | 0.001 |
| Â | 213423_x_at | 0.916 | 2664.5 | 2295 | 2236.3 | 1600.9 | 0.033 |
ribosomal protein, large, P0 | 201033_x_at | 1 | 53465.1 | 34223.5 | 67507 | 55973.4 | 0.014 |
| Â | 208856_x_at | 0.967 | 56980.3 | 36192.7 | 63815.1 | 55584.1 | 0.136 |
| Â | 211720_x_at | 0.927 | 53420.1 | 37636.2 | 66827.6 | 52346.1 | 0.021 |
| Â | 211972_x_at | 0.792 | 50538.4 | 32930.5 | 56212.5 | 48139.1 | 0.051 |
staufen, RNA binding protein (Drosophila) | 213037_x_at | 1 | 6121.4 | 5809 | 6947.7 | 6309.3 | 0.002 |
| Â | 207320_x_at | 0.945 | 6664.7 | 5179.8 | 7435.3 | 5183.5 | 0.5 |
| Â | 208948_s_at | 0.854 | 5936.5 | 4774.2 | 5292.5 | 4762.6 | 0.256 |
sulfotransferase (SULT1A3) | 209607_x_at | 1 | 1798.6 | 1595.5 | 2015.2 | 1866 | 0.001 |
| Â | 210580_x_at | 0.951 | 2497.1 | 1768.8 | 2435.6 | 2173.4 | 0.164 |
U2 small nuclear RNA auxiliary factor 1-like 2 | 208174_x_at | 1 | 677.9 | 529 | 866.7 | 779.8 | 0.001 |
| Â | 213876_x_at | 0.935 | 792.5 | 583.8 | 738.7 | 652.4 | 0.91 |