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Table 3 Sequences of primers and TaqMan probes used for qRT-PCR

From: Clustering of Pseudomonas aeruginosa transcriptomes from planktonic cultures, developing and mature biofilms reveals distinct expression profiles

Primer or probea

Oligonucleotide sequence 5'→3'

FliE F

GGAAATGCGTTCCATGCAA

FliE R

GGAGAGCATTTCCGAAAAGCT

FliE P

TTCAGGCGCCGGCCGAAG

PA0020 F

GCCGGCCTATGGCATCTT

PA0020 R

GCGTTGATGCCGAGGACTT

PA0020 P

CCAGGGCAAGGTCTACATCGATCCG

ClpP F

GGTGGTTGCTCAGTTGCTGTT

ClpP R

CGGCGAGTTGATGTAGAGATGA

ClpP P

CTGGAGGCTGAAAATCCCGAGAAGGA

PA2184 F

GCGCGGCTGGAACACTAT

PA2184 R

CCATGGGTTTCCTCGATGTG

PA2184 P

CGCAACTGAAGACGCGGATCGA

PA5555 F

CGCTGGTGGCCGATGA

PA5555 R

GGCGTCGGGTTCGTAGAGA

PA5555 P

TCAGGAGCTGAAGCACCACTGGGACT

  1. a. Forward primers (F), reverse primers (R) and TaqMan probes (P) are displayed.