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Figure 2 | BMC Genomics

Figure 2

From: Cross genome comparisons of serine proteases in Arabidopsis and rice

Figure 2

Domain Architectures identified in Arabidopsis and rice serine Protease-like proteins. At -Arabidopsis thaliana; Os – Rice (Oryza sativa); B- Bacteria; A- Archaea; E- Eukaryota; Sxx- Serine protease family Sxx domain, where Sxx refers to the serine protease family as per MEROPS [5] classification (see text for details). PDZ- PDZ domain (Pfam [37] accession: PF00595); PA- Protease associated domain (Pfam [37] accession: PF02225); SUB N- Subtilisin N-terminal region (Pfam [37] accession: PF005922); DUF1034- Domain of unknown function (Pfam [37] accession: PF06280); Arf- ADP-ribosylation factor family (Pfam [37] accession: PF00025); C2- C2 domain (Pfam [37] accession: PF00168); zf-CCHC- Zinc knuckle (Pfam [37] accession: PF00098); rve- Integrase core domain (Pfam accession:PF00665); Extensin 2- Extensin-like region (Pfam [37] accession: PF04554); S9 N- Prolyl oligopeptidase, N-terminal beta-propeller domain (Pfam [37] accession: PF02897); PD40- WD40-like beta propeller repeat (Pfam [37] accession: PF07676); DPPIV N- Dipeptidyl peptidase (DPP IV) N-terminal region (Pfam [37] accession: PF00930); Transposase 21- Transposase family tnp2 (Pfam [37] accession: PF02992); Retrotrans gag- Retrotransposon gag protein (Pfam [37] accession: PF03732); ABC1- ABC1 family (Pfam [37] accession: PF03109); LON- ATP-dependent protease La (LON) domain (Pfam [37] accession: PF02190); AAA- ATPase family associated with various cellular activities (Pfam [37] accession: PF00004); UBA- UBA/TN-S (ubiquitin associated) domain (Pfam [37] accession: PF000627); zf-RanBP- Zinc finger in Ran binding protein and others (Pfam [37] accession: PF00641).

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