Table 1 Serine proteases identified in the two plant genomes, by sensitive sequence search methods
From: Cross genome comparisons of serine proteases in Arabidopsis and rice
CLAN | FAMILY | Pfam[37] Accession | Arabidopsis | Rice |
|---|---|---|---|---|
PA(S) | S1 (Chymotrypsin) | PF00089 | 16 | 15 |
SB | S8 (Subtilisin) | PF00082 | 56 | 63 |
SC | S9 (Prolyl oligopeptidase) | PF00326 | 23 | 23 |
| Â | S10 (Carboxypeptidase) | PF00450 | 54 | 66 |
| Â | S28 (Lys. Pro-x Carboxypeptidase) | PF05577 | 7 | 5 |
SE | S12 (D-Ala-D-Ala carboxypeptidase B) | PF00144 | 1 | 1 |
SF | S16 (Lon protease) | PF05362 | 4 | 4 |
| Â | S26 (Signal peptidase I) | PF00717 | 9 | 7 |
SK | S14 (Clp Endopeptidase) | PF00574 | 9 | 13 |
SM | S41 (C-terminal processing peptidase) | PF03572 | 3 | 3 |
| Â | S49 (Protease IV) | PF01343 | 1 | 1 |
| Â | S54 (Rhomboid) | PF01694 | 20 | 18 |
SP | S59 (Nucleoporin autopeptidase) | PF04096 | 3 | 3 |