Table 3 A list of most recent serine protease gene duplications in rice genome. The most recent gene duplicates identified in the segmentally duplicated regions of the rice genome are suffixed with (S). See text for details
From: Cross genome comparisons of serine proteases in Arabidopsis and rice
S. No. | Rice serine protease-like protein | Gene duplicate |
|---|---|---|
Family S1 (DegP protease family) | Â | Â |
1. | LOC_Os02g50880 (S) | LOC_Os06g12780 (S) |
2. | LOC_Os04g38640 | LOC_Os05g49380 |
3. | LOC_Os12g04740 | LOC_Os12g04740 |
Family S8 (Subtilisin family) | Â | Â |
1. | LOC_Os01g56320 | LOC_Os06g48650 |
2. | LOC_Os01g58240 | LOC_Os01g58260 |
3. | LOC_Os01g58280 | LOC_Os01g58290 |
4. | LOC_Os01g64860 (S) | LOC_Os05g36010 (S) |
5. | LOC_Os02g10520 (S) | LOC_Os06g40700 (S) |
6. | LOC_Os02g16940 | LOC_Os02g17090 |
7. | LOC_Os02g17000 | LOC_Os02g17060 |
8. | LOC_Os02g17090 | LOC_Os02g16940 |
9. | LOC_Os02g44590 (S) | LOC_Os04g47150 (S) |
10. | LOC_Os02g53910 | LOC_Os02g53970 |
11. | LOC_Os03g02750 (S) | LOC_Os10g38080 (S) |
12. | LOC_Os03g31630 | LOC_Os07g48650 |
13. | LOC_Os03g40830 | LOC_Os03g55350 |
14. | LOC_Os04g02980 | LOC_Os04g03060 |
15. | LOC_Os04g03800 | LOC_Os04g03810 |
16. | LOC_Os09g26920 | LOC_Os10g25450 |
Family S9 (Prolyl oligopeptidase family) | Â | Â |
1. | LOC_Os01g01830 | LOC_Os04g47360 |
2. | LOC_Os04g47360 | LOC_Os01g01830 |
3. | LOC_Os06g11180 | LOC_Os06g11190 |
4. | LOC_Os07g48970 | LOC_Os07g48970 |
5. | LOC_Os09g28040 | LOC_Os09g29950 |
6. | LOC_Os10g28020 | LOC_Os10g28030 |
Family S10 (Serine carboxypeptidase family) | Â | Â |
1. | LOC_Os01g06490 | LOC_Os01g61690 |
2. | LOC_Os01g11670 | LOC_Os05g50600 |
3. | LOC_Os01g22980 | LOC_Os05g06660 |
4. | LOC_Os02g02320 | LOC_Os07g29620 |
5. | LOC_Os02g42310 (S) | LOC_Os04g44410 (S) |
6. | LOC_Os03g26920 | LOC_Os03g26930 |
7. | LOC_Os03g52040 | LOC_Os03g52080 |
8. | LOC_Os04g25560 | LOC_Os12g15470 |
9. | LOC_Os04g32540 | LOC_Os11g31980 |
10. | LOC_Os05g50570 | LOC_Os05g50580 |
11. | LOC_Os08g44640 | LOC_Os08g44640 |
12. | LOC_Os10g01110 | LOC_Os11g42390 |
13. | LOC_Os11g24290 | LOC_Os11g24410 |
14. | LOC_Os11g24510 | LOC_Os12g39170 |
15. | LOC_Os11g27270 | LOC_Os11g27350 |
Family S14 (Clp protease family) | Â | Â |
1. | LOC_Os01g32350 | LOC_Os03g19510 |
2. | LOC_Os02g42290 (S) | LOC_Os04g44400 (S) |
3. | LOC_Os03g22430 | LOC_Os05g51450 |
4. | LOC_Os08g15270 | LOC_Os12g10590 |
Family S16 (Lon protease family) | Â | Â |
1. | LOC_Os01g54040 (S) | LOC_Os05g44590 (S) |
2. | LOC_Os03g19350 | LOC_Os07g48960 |
3. | LOC_Os03g29540 | LOC_Os07g32560 |
Family S24 (Signal peptidase family) | Â | Â |
1. | LOC_Os03g55640 | LOC_Os09g28000 |
2. | LOC_Os05g23260 | LOC_Os06g16260 |
Family S28 (Lysosomal Pro-X Carboxypeptidase family) | Â | Â |
1. | LOC_Os01g56150 | LOC_Os06g43930 |
2. | LOC_Os10g36780 | LOC_Os10g36780 |
Family S41 (C-terminal processing peptidase family) | Â | Â |
1. | LOC_Os01g47450 | LOC_Os06g21380 |
Family S54 (Rhomboid family) | Â | Â |
1. | LOC_Os01g18100 | LOC_Os03g44830 |
2. | LOC_Os03g24390 | LOC_Os07g46170 (S) |
3. | LOC_Os08g43320 (S) | LOC_Os09g35730 (S) |
Family S59 (Nucleoporin autopeptidase family) | Â | Â |
1. | LOC_Os12g06870 | LOC_Os12g06890 |