Table 2 Predicted DtxR binding sites in corynebacterial genome sequences

DIP0108¹

TTTTCTTTGCCTAGCCTAA

DIP0109–0110

iron ABC transport system

JK0661

DIP0124¹

TTAGGGAACTCTTGCCTTA

-

membrane protein

-

DIP0169

TTAGCTTAGCCCTAGCTAA

-

secreted protein

-

DIP0222¹

TTAGGATAGCTTTACCTAA

-

diphtheria toxin precursor

-

DIP0370

TTAGGTCAGGGTACCCTAA

DIP0371–0373

succinate dehydrogenase complex

cg0445, CE0386

DIP0415

TTAGCTTAACCTTGCCTAT

-

ArsR-family regulatory protein

cg0527, CE0466

DIP0540¹

CTAGGTTAGGGGTGCCTAA

DIP0541

preprotein translocase subunit SecY

-

DIP0579

TTAGGCGACGGTTGCCTCA

-

hypothetical protein

-

DIP0582¹

TTAGGGTTGTGTTACCTTG

DIP0583–0585

iron ABC transport system

-

DIP0586¹

TTAGGGTAGCTTCGCCTAA

DIP0587–0588

siderophore biosynthesis protein

-

DIP0625¹

TTAGGTAAGTGTAGCCTAT

DIP0624–0629³

iron ABC transport system

cg0466, JK0315

DIP0699

TTGTGTTAGCCTAGGCTAA

-

preprotein translocase subunit SecA

-

DIP0894¹

CTAGGATTGCCTACACTTA

-

hypothetical protein

CE1009

DIP0922¹

TAACCTTAGGCTTGCCTTT

-

AraC-family regulatory protein

cg1120

DIP1061¹

TTAGGGTAACCTGTCCAAC

DIP1062-1059³

iron ABC transport system

-

DIP1190

ATGGGGGAGGCTCACATAA

-

peptide transport protein

-

DIP1296¹

TTAGGGTGGGCTAACCTGC

DIP1295-1290

DNA binding protein

JK0985

DIP1520¹

TTAGGTTAACCTTGCTTAA

DIP1519

membrane proteins

-

DIP1626

TGATGGAAACCACCCCTAA

DIP1625-1624

ubiquinol-cytochrome C reductase

-

DIP1669¹

TGAGGGGAACCTAACCTAA

-

heme oxygenase

cg2445

DIP1866

TTATGCTGGGCTATCTTAA

-

bacterioferritin-like protein

cg2782, CE2420

DIP2114¹

AAAGGTAAGCCATAGCTAA

-

alcohol dehydrogenase

-

DIP2161¹

TTGGATTAGCCTACCCTAA

DIP2158–2160

non-ribosomal peptide synthase

-

DIP2202

TGAAGGTACCCCAGCCTAA

-

choline dehydrogenase

-

DIP2219

CTGGGGAACCGTTACCTAA

DIP2220

hypothetical proteins

-

DIP2303

TAAGGATAGGCCACCCCAA

-

Dps protein

cg3327

DIP2330

ATAGGCATGCCTAACCTCA

-

membrane protein

-

Corynebacterium efficiens

CE0125

TTAGGCTAACCTTGCCCAA

-

hypothetical protein

cg0160

CE0386

CGAGGTGAGGCTAGCCTAA

CE0387–0389

succinate dehydrogenase complex

cg0445, DIP0370

CE0466

ATAGCTTAGGCTTACCTGC

-

ArsR-family regulatory protein

cg0527, DIP0415

CE0687

GTTGGACACCCTAACCTAA

CE0683–0686

iron ABC transport system

cg0771

CE0881

TTAGGTACCCTAACCTCAC

CE0882–0884

iron ABC transport system

cg0926, JK1887

CE0912

GTAGGTTACGCGAACGTAG

-

hypothetical protein

cg0955

CE1009

TTAGGCATCCCTTGCCTCG

CE1010

hypothetical proteins

DIP0894

CE1346

AGAGTGTAGGCTTACCTAT

-

hypothetical protein

cg1405

CE1860

TTAGGTTATAGTTTCCTTT

CE1859

hypothetical proteins

-

CE1917

GTGGGTGAGGCAAGCCTAA

-

phage integrase/recombinase

-

CE1940

TGAAGTAACACTACCCTAA

-

cation transporting P-type ATPase

-

CE2420

TTATGGTGCGCTAACCTTG

-

ferritin-like protein

cg2782, DIP1866

CE2790

TCAGGAAAGGTTAGCCCAA

-

hypothetical protein

-

CE2815

CTATGTTTGGCAAGCCTTA

-

hypothetical protein

-

CE2891

CTGGGCTAGGGTCACCTAT

-

hypothetical protein

-

Corynebacterium jeikeium

JK0030

TTCTTTCAGGCTAACCTAT

-

DNA binding protein

-

JK0314

TTAGGTAAGGCTCGACTTA

-

membrane protein

-

JK0315

TAAGGTAACACTATCCTAA

JK0316–0319

iron ABC transport system

cg0466, DIP0625

JK0434

TTAGGTAAGCCTTACCTTT

JK0435–0438

ABC transport system

-

JK0461

TTAGGTTTGGCTTGGCGAA

-

collagen binding protein

-

JK0561

ACTGGCAAGGCTAAGCTAA

JK0560-0559

iron ABC transport system

DIP0108

JK0985

TTTTCTTGGTCTAACCTAA

JK0984-0979

Fe-S cluster assembly system

DIP1296

JK1470

TACGTTTTGCGTAACCTCA

-

secreted protein

-

JK1778

TTAGCTTAGGTTTACCTAT

-

enterochelin esterase

-

JK1780

ATAGGTTAGCCTACCCTTT

-

L-ornithine N₅-oxygenase

-

JK1783

TTAGGTTATGCTAAGTTAA

JK1782-1781

ABC transporter

-

JK1805

TTAGGCAAGGGTAAGCTAA

-

iron utilization protein

-

JK1809

ACAGGTTAGGCTAACCAGA

JK1808-1806

ABC transport system

-

JK1812

TTAGGTAAGGCTACCATCA

-

solute binding protein

-

JK1815

CAAGTGAAGGCTTACCTTA

JK1816–1818

iron ABC transport system

-

JK1819

CTTGATTAGCCTAACCTAA

JK1820–1821

siderophore synthesis system

-

JK1887²

TTAAGCAAGGCTTGACTAA

JK1886-1884

iron ABC transport system

cg0926, CE0881

TAAGGTTCGGCTAACTGTA

JK1934

GCAGGTGACGCTAACCTGT

-

HTH_3-family regulatory protein

-

JK1979

GTAGCCTAGCCTTACCTAA

-

ornithine cyclodeaminase

-

JK1983

GAAGGTGTGGCTAACCTAA

JK1984–1985

iron ABC transport system

-