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Table 4 Decreased FFD SNPs at A|T dinucleotides

From: Strand bias in complementary single-nucleotide polymorphisms of transcribed human sequences: evidence for functional effects of synonymous polymorphisms

FFD SNPs

Substitution type

|nonT

|T

χ2 test

Non-CpG site

G→A

161

46

χ2 = 7.9,

v = 1, p = 0.005

 

A→G

95

53

 

CpG site

G→A

505

149

χ2 = 19.1,

v = 1, p < 0.001

 

A→G

202

114