Table 4 The top 25 genes exhibiting increased mRNA abundance 2 hours post activation.
From: Development and validation of a bovine macrophage specific cDNA microarray
Clone | E value | Accession No. | Gene Symbol | Gene | Fold Increase | FDRmax | P value |
|---|---|---|---|---|---|---|---|
pIL8 | 0.0 | NM_173925 | IL8 | Interleukin 8 | 40.00 | 1.23E-18 | 4.91E-22 |
MARC_3BOV_60P17 | 0.0 | NM_174299 | CXCL2 | Chemokine (C-X-C motif) ligand 2 (GROβ/MIP2A) | 38.20 | 1.25E-15 | 1.24E-18 |
C0006019e20 | 0.0 | NM_181015 | PRNP | Prion protein | 28.13 | 1.05E-20 | 2.08E-24 |
MARC_1BOV_101M3 | 0.0 | NM_174263 | CCL20 | Chemokine (C-C motif) ligand 20 (MIP3A) | 25.81 | 3.14E-10 | 3.56E-12 |
MARC_1BOV_94L3 | 0.0 | NM_174300 | CXCL6 | Chemokine (C-X-C motif) ligand 6 | 22.91 | 1.72E-11 | 1.23E-13 |
C0005209b8 | 6.00E-72 | XM_612426 | CCRN4L | CCR4 carbon catabolite repression 4-like | 20.49 | 1.64E-11 | 1.14E-13 |
C0006018n14 | 0.0 | NM_174006 | CCL2 | Chemokine (C-C motif) ligand 2 (MCP-1) | 19.45 | 1.32E-07 | 4.19E-09 |
C0005204j16 | 0.0 | XM_864683 | CXCL3 | Chemokine (C-X-C motif) ligand 3 (GROγ/MIP2b) | 18.16 | 1.20E-13 | 3.40E-16 |
C0006020d11 | 0.0 | XM_865242 | ZFAND2A | Zinc finger, AN1-type domain 2A | 17.61 | 1.10E-14 | 1.31E-17 |
C0006011e13 | e-179 | CK976904 | - | EST | 16.71 | 3.10E-08 | 8.41E-10 |
C0005208k22 | e-167 | NM_173198 | NR4A3 | Nuclear receptor subfamily 4, group A, member 3 | 15.65 | 2.39E-12 | 1.14E-14 |
C0006020e20 | 0.0 | CB419326 | - | EST | 14.07 | 9.10E-12 | 5.60E-14 |
MARC_3BOV_36F6 | 0.0 | NM_175827 | CCL5 | Chemokine (C-C motif) ligand 5 (RANTES) | 13.84 | 2.90E-12 | 1.47E-14 |
C0006018g13 | 0.0 | XM_611249 | SLCO4A1 | Solute carrier organic anion transporter family, member 4A1 | 13.79 | 4.62E-10 | 5.89E-12 |
MARC_1BOV_72M12 | 0.0 | XM_866821 | CXCL10 | Chemokine (C-X-C motif) ligand 10 (IP10) | 13.71 | 1.09E-05 | 6.09E-07 |
C0005199c13 | 0.0 | AY248754 | TNFAIP3 | TNF-alpha induced protein 3 | 13.48 | 2.34E-08 | 5.90E-10 |
C0006015e11 | 0.0 | XM_881561 | PMAIP1 | Phorbol-12-myristate-13-acetate-induced protein 1 | 12.99 | 1.95E-12 | 8.90E-15 |
C0005202i8 | 0.0 | XM_583725 | APOBEC3A | Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A | 12.96 | 1.20E-13 | 2.97E-16 |
MARC_3BOV_120N21 | 0.0 | NM_174028 | CSF3 | Colony stimulating factor 3 (granulocyte) (G-CSF) | 12.76 | 8.11E-11 | 7.73E-13 |
C0006015n15 | 2.00E-69 | NM_002748 | MAPK6 | Mitogen-activated protein kinase 6 (erk-3) | 12.64 | 8.88E-12 | 5.11E-14 |
C0006016h15 | 0.0 | XM_613370 | RGS1 | Regulator of G-protein signalling 1 | 12.59 | 5.10E-09 | 1.00E-10 |
C0006013p15 | e-158 | CB534198 | - | EST | 12.59 | 1.93E-11 | 1.50E-13 |
C0005202d9 | 0.0 | XM_870158 | ANKRD22 | Ankyrin repeat domain 22 | 11.99 | 6.36E-17 | 3.79E-20 |
MARC_1BOV_57B12 | 0.0 | NM_174348 | ICAM1 | Intercellular adhesion molecule 1 (CD54) | 11.40 | 6.40E-10 | 9.15E-12 |
C0005206b23 | 3.00E-82 | NM_001432 | EREG | Epiregulin | 10.98 | 1.98E-07 | 6.61E-09 |