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Table 2 Pair-wise comparison of the 1,528 conserved genes among the four sequenced strains of Xylella fastidiosa.

From: Analysis of the genome-wide variations among multiple strains of the plant pathogenic bacterium Xylella fastidiosa

Strains Bp Paired (%) Unpaired (%) INDEL (%) External (%) Internal (%) SNP (%) Transition (%) Transversion (%)
9a5c + Ann1 3051309 2951615 (96.733) 99694 (3.267) a 56195 (1.842) 55009 (1.803) 1186 (0.039) 43499 (1.426) 6390 (0.209) 37071 (1.215)
9a5c + Dixon 3038700 2915651 (95.951) 123049 (4.049) a 82760 (2.724) 80563 (2.651) 2197 (0.072) 40289 (1.326) 5956 (0.196) 34277 (1.128)
9a5c + Temecula1 3047657 2971366 (97.497) 76291 (2.503) c 31527 (1.034) 30196 (0.991) 1331 (0.044) 44764 (1.469) 6588 (0.216) 38176 (1.253)
Ann1+ Dixon 3019029 2920562 (96.738) 98467 (3.262) b 75229 (2.492) 73471 (2.434) 1758 (0.058) 23238 (0.77) 3224 (0.107) 19939 (0.66)
Ann1+ Temecula1 3047447 2971117 (97.495) 76330 (2.505) c 57413 (1.884) 55283 (1.814) 2130 (0.07) 18917 (0.621) 3071 (0.101) 15808 (0.519)
Dixon+Temecula1 3013442 2903990 (96.368) 109452 (3.632) b 83880 (2.784) 80452 (2.67) 3428 (0.114) 25572 (0.849) 3812 (0.126) 21704 (0.72)
Average 3036264 2939050 (96.80) 97213 (3.203) 64500 (2.13) 62495 (2.06) 2005 (0.07) 32713 (1.08) 4840 (0.16) 27829 (0.92)
  1. a, b, c – Duncan grouping of ANOVA analysis result;