Table 4 Repetitive element composition of the minor and major ULBP gene clusters
From: Genomic organization and evolution of the ULBP genes in cattle
Repetitive element | Minor ULBP cluster | Major ULBP cluster |
|---|---|---|
SINE | 5,681 bp (10.1%) | 37,368 bp (8.8%) |
LINE | 9,973 bp (17.7%) | 69,177 bp (16.3%) |
LTR | 2,406 bp (4.3%) | 18,161 bp (4.3%) |
DNA (including MER1/2) | 2,388 bp (4.2%) | 14,749 bp (3.5%) |
Small RNA | 0 bp (0.0%) | 219 bp (0.1%) |
Satellites | 0 bp (0.0%) | 0 bp (0.0%) |
Simple repeats | 893 bp (1.6%) | 2,446 bp (0.6%) |
Low complexity | 394 bp (0.7%) | 1,614 bp (0.4%) |
Total repetitive elements | 21,735 bp (38.6%) | 143,734 bp (34.0%) |