Skip to main content

Table 6 Expression ratios of genes at or near sites of indels.

From: Genome sequence alterations detected upon passage of Burkholderia mallei ATCC 23344 in culture and in mammalian hosts

 

A. >2X UP REGULATED GENES NEAR INDELS

>2X Expression Altered Near Gene

Intergenic Indels

BMAA1865

Human liver 2, BMAA1868

BMAA1865

Human blood 1, BMAA1866

BMAA1865

Human blood 5, BMAA1868

BMAA0112

FMH2, BMAA0117

 

B. EXPRESSION RATIOS OF INDEL GENES

Ratio

Intergenic Indels

0.08

Human liver 1, BMA1135

0.29

Human liver 2, BMAA1868

0

Human liver 3, BMAA0375

0.47

Human blood 1, BMAA1866

-0.34

Human blood 2, BMAA0117

0.13

Human blood 3, BMAA0375

0.35

Human blood 4, BMAA1128

0.42

Human blood 5, BMAA1868

 

Indels within coding regions

0.62

Human liver 1, BMAA0729

0.63

Human liver 2, BMA0328

0.04

Human liver 3, BMAA1903

0.06

Human liver 4, BMA0685

0.93

Human blood 1, BMA3028

-0.15

Human blood 2, BMAA0789

0.48

Human blood 3, BMA1903