Skip to main content

Table 5 Comparison with BCMP11/ABCC11 subtypes.

From: Discovery and validation of breast cancer subtypes

   BCMP11/ABCC11
   Group 1 Group 2 Group 3
SLC39A6/GATA3 Group 1 42 0 6
  Group 2 8 21 3
  Group 3 0 0 16
Sørlie subtype Normal-like 6 0 0
  ERBB2+ 4 7 0
  Luminal A 28 0 0
  Luminal B 9 2 0
  Basal 5 8 6
  1. (Upper) Each of the training dataset samples was classified twice: first to one of the SLC39A6/GATA3 groups and then to one of the BCMP11/ABCC11 subtypes. The entries in the table are the number of samples classified to the SLC39A6/GATA3 (row) subtype and to the BCMP11/ABCC11 subtype (column). (Lower) A subset of the Norway/Stanford samples were classified to one of the three subtypes presented in this paper and the classification is compared with the Sørlie et al. (2003) classification. Each entry in the table is the number of Norway/Stanford samples classified to the Sørlie et al. (2003) subtype (row) and the BCMP11/ABCC11 subtype (column)