Semiparametric approach to characterize unique gene expression trajectories across time

Rodriguez-Zas, Sandra L; Southey, Bruce R; Whitfield, Charles W; Robinson, Gene E

doi:10.1186/1471-2164-7-233

BMC Genomics

Table 2 Estimates, standard error (SE) and P-value of the intercept, linear, quadratic and cubic terms describing the 10 groups using a semiparametric approach in the ligustica and mellifera data sets.

From: Semiparametric approach to characterize unique gene expression trajectories across time

		Intercept			Linear			Quadratic			Cubic
Group	Dataset	Estimate	SE	P-value	Estimate	SE	P-value	Estimate	SE	P-value	Estimate	SE	P-value
1	ligustica	-1.4922	0.0774	<0.0001	0.0813	0.0403	0.044	-0.0092	0.0058	0.1144	0.0003	0.0002	0.122
	mellifera	-1.4635	0.0704	<0.0001	0.0685	0.0372	0.0654	-0.0078	0.0054	0.1541	0.0003	0.0002	0.1223
2	ligustica	-1.0266	0.0624	<0.0001	0.1773	0.0351	<0.0001	-0.017	0.0052	0.0011	0.0006	0.0002	0.0025
	mellifera	-0.9844	0.0612	<0.0001	0.2214	0.0335	<0.0001	-0.0232	0.005	<0.0001	0.0009	0.0002	<0.0001
3	ligustica	-0.0964	0.0685	0.159	-0.2606	0.0339	<0.0001	0.025	0.0049	<0.0001	-0.0008	0.0002	0
	mellifera	-0.0233	0.0599	0.6969	-0.2479	0.0307	<0.0001	0.0231	0.0046	<0.0001	-0.0007	0.0002	<0.0001
4	ligustica	0.2749	0.1579	0.0818	0.9044	0.0956	<0.0001	-0.1	0.0144	<0.0001	0.0025	0.0006	<0.0001
	mellifera	-1.1858	0.1465	<0.0001	0.5999	0.0886	<0.0001	-0.023	0.0134	0.0864	-0.0006	0.0005	0.2179
5	ligustica	0.7813	0.0536	<0.0001	-0.2726	0.0289	<0.0001	0.027	0.0043	<0.0001	-0.0009	0.0002	<0.0001
	mellifera	0.9021	0.0553	<0.0001	-0.2764	0.0284	<0.0001	0.0272	0.0042	<0.0001	-0.0009	0.0002	<0.0001
6	ligustica	-0.3338	0.0702	<0.0001	0.2797	0.0328	<0.0001	-0.0255	0.0049	<0.0001	0.0008	0.0002	<0.0001
	mellifera	-0.1963	0.0593	0.0009	0.2989	0.033	<0.0001	-0.0337	0.0049	<0.0001	0.0013	0.0002	<0.0001
7	ligustica	1.5573	0.0526	<0.0001	-0.2004	0.0281	<0.0001	0.02	0.0042	<0.0001	-0.0007	0.0002	<0.0001
	mellifera	1.612	0.0588	<0.0001	-0.1945	0.0281	<0.0001	0.0183	0.0042	<0.0001	-0.0006	0.0002	0.0001
8	ligustica	0.8752	0.0685	<0.0001	0.3204	0.0391	<0.0001	-0.0336	0.0058	<0.0001	0.0012	0.0002	<0.0001
	mellifera	1.0052	0.0671	<0.0001	0.286	0.0394	<0.0001	-0.0309	0.0059	<0.0001	0.0011	0.0002	<0.0001
9	ligustica	2.5404	0.0607	<0.0001	-0.1607	0.0341	<0.0001	0.0164	0.0051	0.0013	-0.0006	0.0002	0.002
	mellifera	2.636	0.0569	<0.0001	-0.2106	0.0328	<0.0001	0.0204	0.0049	<0.0001	-0.0007	0.0002	0.0003
10	ligustica	2.2781	0.1012	<0.0001	0.4776	0.0615	<0.0001	-0.055	0.0092	<0.0001	0.0019	0.0004	<0.0001
	mellifera	2.4787	0.1008	<0.0001	0.2641	0.0606	<0.0001	-0.029	0.009	0.0013	0.0011	0.0004	0.0026

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ISSN: 1471-2164

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