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Table 2 Transferability assessment of HapMap SNPs

From: How well do HapMap SNPs capture the untyped SNPs?

Population SNPs Transferability Performance with r2≥ 0.80
  Number of SNPs Mean-r2 Min-r2 Coverage
European 843 0.984 0.459 96.4%
Asian 693 0.982 0.410 97.1%
African 406 0.982 0.510 94.8%
  1. HapMap data are used as the reference panel and the corresponding population in NIEHS is assessed. HapMap CEU panel for NIEHS European assessment; HapMap CHB panel for NIEHS Asian assessment and HapMap YRI panel for NIEHS African assessment.