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Table 1 Gene content of the mitochondrial genome of Ligia oceanica.

From: The complete mitochondrial genome of the common sea slater, Ligia oceanica (Crustacea, Isopoda) bears a novel gene order and unusual control region features

Gene

Strand

GenBank position no.

Size (nts)

Size (aa)

Start codon

Stop codon

Intergenic nucleotides

trnQ

-

1–63

63

   

11

trnM

+

75–140

66

   

-21

nad2

+

120–1142

1023

340

ATG

TAA

-15

trnC

-

1128–1181

54

   

0

trnY

-

1182–1243

62

   

4

cox1

+

1248–2786

1539

512

ACG

TAA

-5

trnL2-UUR

+

2782–2843

62

   

0

cox2

+

2844–3527

684

227

ATA

TAG

0

trnK

+

3528–3590

63

   

-2

trnD

+

3589–3648

60

   

1

atp8

+

3650–3805

156

51

GTG

TAA

-7

atp6

+

3799–4470

672

223

ATG

TAA

-1

cox3

+

4470–5256

787

262

ATG

T

0

trnG

+

5257–5317

61

   

3

nad3

+

5321–5671

351

116

ATT

TAA

-2

trnA

+

5670–5729

60

   

18

nad1

-

5748–6691

944

314

ATA

TA

-3

trnL1-CUN

-

6689–6750

62

   

-4

trnN

+

6747–6810

64

   

*

rrnS

+

6811–7660

850

   

*

trnW

-

7661–7726

66

   

24

trnV

-

7751–7806

56

   

36

trnI

+

7843–7899

57

   

*

non-coding region

 

7900–8636

737

   

*

trnE

+

8637–8696

60

   

2

trnS1-AGY

+

8699–8760

62

   

17

cob

-

8778–9911

1134

377

ATA

TAA

0

trnT

-

9912–9971

60

   

52

nad5

+

10024–11688

1665

554

ATT

TAG

-10

trnF

+

11679–11741

63

   

-4

trnH

-

11738–11800

63

   

-1

nad4

-

11800–13134

1335

444

ATG

TAA

-7

nad4L

-

13128–13418

291

96

ATA

TAA

12

trnP

-

13431–13492

62

   

13

nad6

+

13506–13994

489

162

ATT

TAG

-2

trnS2-UCN

+

13993–14055

63

   

*

rrnL

-

14056–15289

1234

   

*

  1. * Gene borders defined by borders to adjacent genes.