Mining housekeeping genes with a Naive Bayes classifier

BMC Genomics

Table 3 GO terms specific for the human housekeeping or tissue specific genes set

GO terms specific for:	GO ID	Description	% of HK genes	% of TS genes
HK genes	GO:0006412	protein biosynthesis	29.1	-
	GO:0003735	structural constituent of ribosome	23.3	-
	GO:0005840	ribosome	18.4	-
	GO:0005842	cytosolic large ribos. subunit (sensu Euk.)	10.7	-
	GO:0030529	ribonucleoprotein complex	4.9	-
	GO:0006414	translational elongation	3.9	-
TS genes	GO:0005615	extracellular space	-	14.8
	GO:0004295	trypsin activity	-	8.4
	GO:0004263	chymotrypsin activity	-	8.4
	GO:0005576	extracellular region	-	6.7
	GO:0006810	transport	-	6.6
	GO:0008233	peptidase activity	-	6.6

GO = Gene Ontology, GO ID = Gene Ontology term identifier, HK = housekeeping, TS = tissue specific.

ISSN: 1471-2164