Skip to main content

Table 6 Deletion regions from the less conservative "cLOH/Model B"

From: Genome-wide loss of heterozygosity and copy number alteration in esophageal squamous cell carcinoma using the Affymetrix GeneChip Mapping 10 K array

Chr arm

No. regions in each chr arm

Cytoband(s)

Total no. SNPs in each chr arm

2q

2

2q34-q35 2q35

33

3p

7

3p26 (2) 3p26-p25 3p21.32-p2.2

182

4p

4

4p16.3-p15.3 4p15.3 4p12 4p12-q12

100

4q

14

4q13 (2) 4q13-4q22 4q26 4q27 4q27-q28 4q28

377

  

4q28-q32 4q32 4q32-q33 4q33-q34 4q34

 

5q

15

5q11.2 5q11.2-q12 5q12 5q13 5q13-q15 5q15 5q15-q21

386

  

5q21-q22 5q22 (2) 5q23.1 5q23.1-q23 5q32-q34 5q34-q35 5q35

 

8p

2

8p22 (2)

13

9p

5

9p24.3-p23 9p23-p21 9p21.3-p21.1 9p21-p13 9p13-q22

367

9q

2

9q22.2-q22.3 9q22.3-q33

147

13q

7

13q12.2-q14 13q14-q21.1 13q21.1-q21.33

365

  

13q21.33-q31.1 13q31.3-q32.1 13q32.1-q33 13q33

 

17p

2

17p13-p12 17p12-q21

96

17q

3

17q21-q22 17q22-q24 17q24

57

21q

1

21q22.2

5

Total no. deletion regions

64

Total no. SNPs

2128