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Table 2 Differences in intron length of orthologous intron pairs are correlated with differences in splice sites scores and ESE and A-nucleotide density

From: Compensatory relationship between splice sites and exonic splicing signals depending on the length of vertebrate introns

 

Human/Chimp

Human/Mouse

Human/Rat

Human/Dog

Human/Chicken

Mouse/Rat

Mouse/Dog

Total splice site score

9.19E-6

5.31E-9

2.02E-6

2.33E-3

2.64E-43

0.104

6.31E-5

Donor score

1

8.79E-3

1.38E-4

0.0485

4.96E-25

1

2.33E-6

Acceptor score

1.75E-6

2.33E-8

3.17E-3

0.521

2.96E-25

1

8.52E-3

ESE sites

1

3.49E-3

0.0149

7.80E-4

2.10E-29

1

3.45E-4

A-content

1

1.62E-4

1.08E-06

5.89E-9

2.28E-83

1.45E-3

5.37E-28

  1. In all significant cases, a larger intron tended to correspond with stronger signals. The table shows Bonferroni-corrected (n = 35) p-values for chi-square tests performed on 2 by 2 contingency tables of the form shown in Table 1.
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BMC Genomics

ISSN: 1471-2164

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