From: Conservation of noncoding microsatellites in plants: implication for gene regulation
CNMSs | Method | Motif Name | Recognized Sequence | Motif Function |
---|---|---|---|---|
(GA)n | PlantCARE | GAG-motif | AGAGAGa | part of a light responsive element [35,37] |
 | PLACE | GAGAGMGSA1 | (GA)9 | Binding site for GAGA-binding factor, and Gbp is a light-responsive gene [12]. |
(GAA)n | PlantCARE | TCA-element | aAGAAgaaga | salicylic acid responsive element [39] |
(CT)n | PlantCARE | TCCC-motif | TCTCtCT | part of a light responsive element [34,35]. |
 | PLACE | CTRMCAMV35S | TCTCTCTCT | CT-rich motif found in a 60-nt region downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression [36]. |
(CTT)n | Â | TCA-element | TCtTCTTCTT | salicylic acid responsive element [38] |