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Table 1 Summary statistics are given for the PASA-generated assemblies in rice and Arabidopsis.

From: Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis

Number Rice Arabidopsis
Total ESTs 1,156,705 690,119
Total mRNAs 35,078 (33,799 FL) 66,642 (61,117 FL)
Total Transcripts 1,203,577 690,119
Survive Cleaning 1,190,502 (33,797 FL) 683,137 (61,113 FL)
Map to Genome 1,149,730 (32,349 FL) 671,774 (61,085 FL)
Valid Alignments 1,055,860 (30,099 FL) 603,234 (56,668 FL)
Excluding Single Exon Transcripts 501,379 (30,099 FL) 369,092 (56,668 FL)
PASA alignment assemblies 43,869 (23,308 FL) 29,183 (22,951 FL)
PASA assembly clusters 27,497 (19,888 FL) 21,922 (18,701 FL)