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Table 3 Summation of the distribution of the nine alternative splicing classes by events, assembly, cluster and gene for rice and Arabidopsis.

From: Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis

Rice
Isoform Events Assemblies Clusters Genes
AA 6,823 (18.6%) 8,171 (34.6%) 2,840 (31.8%) 2,838 (32.4%)
AD 3,604 (9.8%) 4,652 (19.7%) 1,599 (17.9%) 1,619 (18.5%)
ATE 4,188 (11.4%) 4,227 (17.9%) 1,417 (15.8%) 1,503 (17.1%)
SE 1,339 (3.7%) 1,707 (7.2%) 1,142 (12.8%) 1,119 (12.8%)
RE 1,496 (4.1%) 1,957 (8.3%) 1,142 (12.8%) 1,128 (12.9%)
IWI 2,444 (6.7%) 2,513 (10.7%) 2,139 (23.9%) 2,085 (23.8%)
TWI 2,982 (8.1%) 3,141 (13.3%) 2,543 (28.4%) 2,475 (28.2%)
SI 6,887 (18.8%) 7,592 (32.2%) 4,035 (45.1%) 3,933 (44.8%)
RI 6,887 (18.8%) 5,579 (23.7%) 4,035 (45.1%) 3,924 (44.7%)
Totals 36,650 23,592 8,945 8,772
Arabidopsis
Isoform Events Assemblies Clusters Genes
AA 3,885 (23.9%) 4,220 (36.2%) 1,720 (33.4%) 1,793 (33.8%)
AD 1,854 (11.4%) 2,179 (18.7%) 865 (16.8%) 906 (17.1%)
ATE 900 (5.5%) 913 (7.8%) 340 (6.6%) 390 (7.3%)
SE 396 (2.4%) 442 (3.8%) 348 (6.8%) 357 (6.7%)
RE 415 (2.6%) 486 (4.2%) 348 (6.8%) 361 (6.8%)
IWI 722 (4.4%) 729 (6.3%) 685 (13.3%) 695 (13.1%)
TWI 770 (4.7%) 794 (6.8%) 713 (13.8%) 743 (14.0%)
SI 3,655 (22.5%) 3,667 (31.4%) 2,467 (47.9%) 2,521 (47.5%)
RI 3,655 (22.5%) 2,945 (25.3%) 2,467 (47.9%) 2,510 (47.2%)
Totals 16,252 11,665 5,155 5,313
  1. Percentages are based upon the total counts shown below. They do not include those assemblies, clusters, and genes not implicated in alternative splicing. An event is defined as the occurrence of one of the nine isoforms within an assembly. An assembly derived from overlapping EST and FL-cDNA alignments can contain more than one event.