Table 5 Frame change and protein truncation statistics by class for FL-cDNAs supported assemblies within the same cluster.
From: Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis
Rice | |||
|---|---|---|---|
Isoform | Total | No. with Frame Changes | Average % of protein length |
AA | 61 | 44 (72.1%) | 74.7 |
AD | 36 | 22 (61.1%) | 76.6 |
ATE | 28 | 0 (0%) | 83.9 |
SE | 9 | 9 (100%) | 56.4 |
RE | 11 | 5 (45.5%) | 79.2 |
IWI | 33 | 0 (0.0%) | 77.2 |
TWI | 127 | 0 (0.0%) | 69.1 |
SI | 14 | 14 (100%) | 77.6 |
RI | 165 | 10 (6.1%) | 73.1 |
Arabidopsis | |||
Isoform | Total | No. with Frame Changes | Average % of protein length |
AA | 120 | 94 (78.3%) | 73.6 |
AD | 62 | 45 (72.6%) | 73.4 |
ATE | 7 | 0 (0%) | 70.1 |
SE | 5 | 5 (100%) | 75.1 |
RE | 5 | 0 (0%) | 80.0 |
IWI | 20 | 0 (0%) | 76.8 |
TWI | 66 | 0 (0%) | 72.0 |
SI | 23 | 23 (100%) | 74.0 |
RI | 302 | 20 (6.6%) | 77.2 |