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Figure 5 | BMC Genomics

Figure 5

From: Evaluation of reference-based two-color methods for measurement of gene expression ratios using spotted cDNA microarrays

Figure 5

Correlation between direct and reconstructed ratios. Ratio plots from Kidney vs. Breast comparisons are shown. Upper panels: scatter plots between direct ratios and each of the three reconstructed ratios (RefOligo, RefPool, One-Color). Lower panels: scatter plots between the reconstructed ratios. Ratio plots for the remaining tissue comparisons are shown as supplementary material [see Additional file 2]. In all cases, only ratios from spots with intensity values 2 SD above the average slide background were used.

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