Skip to main content

Advertisement

Table 1 Genes more highly expressed in the duodenum of genetically susceptible animals compared to resistant

From: Gene expression profiling of Naïve sheep genetically resistant and susceptible to gastrointestinal nematodes

Human Refseq: Genbank
accession number
Gene description Gene name Ensembl human gene
Cytogenetic band
Contig BLAST
E value
Fold increase
in expression
P value
NM_003226* Intestinal trefoil factor 3 TFF3 21q22.3 3 × 10-59 1.2 7.7 × 10-20
NM_006398* Ubiquitin D UBD 6p22.1 1 × 10-52 1.3 1.8 × 10-12
NM_003122* Serine protease inhibitor, Kazal type 1 SPINK1 5q32 2 × 10-58 1.3 5.5 × 10-10
NM_001009555 SH3 domain protein D19 EVE1 4q31.3 0 1.8 3 × 10-9
NM_004295 TNF receptor-associated factor 4 TRAF4 17q11.2 0 1.1 1.3 × 10-8
NM_022342 Kinesin family member 9 KIF9 3p21.31 0 1.4 1.8 × 10-7
NM_005646 TAR (HIV) RNA binding protein 1 TARBP1 1q42.2 0 1.2 2 × 10-7
NM_033503 Bcl2 modifying factor BMF 15q15.1 1 × 10-18 1.2 3.7 × 10-7
NM_003392 Wingless-type MMTV integration site family, member 5A WNT5A 3p14.3 6 × 10-58 1.2 4.1 × 10-7
NM_000179 MutS homologue 6 MSH6 2p16.3 0 1.2 8 × 10-7
NM_001655 Archain 1 ARCN1 11q23.3 0 1.2 1.4 × 10-6
NM_079423 Myosin light polypeptide 6 MYL6 12q13.2 0 1.1 1.9 × 10-6
NM_006184 Nucleobindin 1 NUCB1 19q13.33 0 1.1 3.4 × 10-6
NM_178156 Fucosyltransferase 8 FUT8 14q23.3 0 1.3 4.5 × 10-6
NM_005533 Interferon induced protein 35 IFI35 17q21.31 3 × 10-77 1.1 6.7 × 10-6
NM_000062 Serine (or cysteine) proteinase inhibitor, clade G SERPING1 11q12.1 2 × 10-50 1.2 9 × 10-6
NM_002133 Decycling heme oxygenase 1 HMOX1 22q12.3 0 1.1 1.1 × 10-5
NM_002816 Proteasome 26S subunit PSMD12 17q24.2 0 1.2 1.1 × 10-5
NM_002116 Major histocompatibility complex, class I, A HLA-A 6p21.33 8 × 10-35 1.1 1.2 × 10-5
NM_013442 Stomatin-like 2 STOML2 9p13.3 0 1.2 1.2 × 10-5
NM_201265 Bone marrow stromal cell-derived ubiquitin-like 7 BMSC-UbP 15q24.1 0 1.3 1.5 × 10-5
NM_016248 A kinase anchor protein 11 AKAP11 13q14.11 1 × 10-44 1.2 1.8 × 10-5
NM_006808 Sec61 beta subunit SEC61B 9q22.33 1 × 10-138 1.1 1.9 × 10-5
NM_032492 Jagunal homologue 1 JAGN1 3p25.3 1 × 10-180 1.1 2.8 × 10-5
NM_002083 Glutathione peroxidase 2 GPX2 14q23.3 0 1.2 3.3 × 10-5
  1. * More than one EST corresponding to this gene was differentially expressed and their probabilities were combined.