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Table 3 Number of divergent genes (Log Ratio <-1) in each strain for each functional category

From: Comparative genomics profiling of clinical isolates of Aeromonas salmonicida using DNA microarrays

      A. salmonicida subsp. salmonicida A. salmonicida atypical
Functional category: Abea Acab Asac Asmd 33658 51413 80204-1 BC6129 N1718 N2461 N2660 N3395 N4399 SS70.1 N2517 N4705
Antibiotic resist 11 14 7 5 0 0 0 0 0 0 0 4 0 6 3 0
CHO/surface 30 36 20 18 4 3 3 4 3 6 3 7 3 9 14 0
Flagella/pilin 50 30 29 12 1 1 0 0 0 1 1 1 1 2 16 0
IC protect 3 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Iron systems 16 15 7 6 0 0 0 0 0 1 0 2 0 2 5 0
OMP 53 56 33 21 6 4 5 1 3 8 1 4 1 16 22 2
Other 24 43 22 13 4 3 3 3 3 4 3 3 3 7 18 0
Plasmid 28 25 8 10 0 0 0 0 3 4 0 5 1 4 6 0
Secretion 22 17 4 7 1 0 0 1 0 1 0 4 0 6 2 0
Sigma 5 7 3 2 0 0 0 0 0 0 0 1 1 1 2 0
Toxin 15 19 6 5 0 0 0 0 0 1 0 0 0 2 6 0
Transport 51 59 39 19 3 4 0 0 1 5 0 6 0 15 31 1
Transposon 119 99 54 62 6 4 6 4 11 36 6 13 7 6 50 2
Total 326 321 187 144 17 12 11 7 18 57 7 36 10 49 136 4
  1. aAbe – A. bestiarum
  2. bAca – A. caviae
  3. cAsa – A. salmonicida subsp. achromogenes
  4. dAsm – A. salmonicida subsp. masoucida