Table 2 List of known immune genes added as reference genes to the array.
From: Development of a chicken 5 K microarray targeted towards immune function
Gene | EST | Clone ID | Accession no. |
|---|---|---|---|
AH221 | CTN2_C0000858f10.q1kT7SCF | C0000858F10 | AM064266 |
AH294/RANTES | 603404971F1 | C0000737M17 | BU397782 |
β2 microglobulin | CTst_C0000869a17.q1kT7SCF | C0000869A17 | AM068376 |
BAFF | CBN1_C0000466j11.q1kT7SCF | C0000467J11 | AM066201 |
BMP10 | 604156553F1 | C0003869J14 | BU210183 |
BMP2 | 603213309F1 | C0003763A3 | BU444424 |
BMP4 | 603363891F1 | C0000429F23 | BU473912 |
BMP6 | 603604307F1 | C0003811M1 | BU287807 |
BMP7 | 603500540F1 | C0000717O9 | BU333004 |
BMP8A | 603956728F1 | 603956728F1 | BU425800 |
CC chemokine receptor 6 | 603508559F1 | C0002794E15 | BU267610 |
CC CKR 11 | 603367511F1 | C0000439E3 | BU465158 |
CC LARC/MIP-3A | 603534015F1 | C0002806N3 | BU398190 |
cCAF | CBN1_C0000465h11.q1kT7SCF | C0000465H11 | AM065832 |
CD135 antigen | 603812446F1 | C0001334K11 | BU376898 |
CD137 | pat.pk0038.d7.f | C0004737E4 | AI980851 |
CD153 | pat.pk0072.b5.f | C0004738K22 | AI982035 |
CD154 | 603535227F1 | C0001006F7 | BU398104 |
CD18 | CBN1_C0000468e11.q1kT7SCF | C0000468E11 | AM066422 |
CD2 | pgn1c.pk014.i9 | pk014I9 | CB017050 |
CD200 | pat.pk0062.c8.f | C0004738C17 | AI981679 |
CD226 | pat.pk0020.d12 | C0004739G22 | AI980296 |
CD28 | CTst_C0000892d20.q1kT7SCF | C0000892D20 | AM070143 |
CD3 | C0001679M3_G02_008.AB1 | C0001679M3 | AM070515 |
CD36 | 603543789F1 | C0001028A23 | BU311037 |
CD4 | pk017a12 | pk017a12 | CB017654 |
CD40L | pgm2n.pk009.d11 | pk009d11 | BM488880 |
CD44-like | 603745662F1 | C0003894K15 | BU253134 |
CD45 | 603767294F1 | C0003827K23 | BU446679 |
CD59 | 603212850F1 | C0000363D13 | BU447971 |
CD63 antigen | 603783352F1 | C0001268G14 | BU243877 |
CD7 | pat.pk0040.d6.f | C0004737K4 | AI981043 |
CD79A | CBst_CHK02000039f07.q1kT7SCF | CHK0200003F7 | AM071949 |
CD8 | CTst_C0000877k01.q1kT7SCF | C0000877K1 | AM069615 |
CD82 | CTst_C0000892l24.q1kT7SCF | C0000892L24 | AM070329 |
CD83 antigen | 603771889F1 | C0001238B24 | BU457418 |
CD84 | CTN1_C0000798o19.q1kT7SCF | C0000798O19 | AM070961 |
CD98 light chain | CBN1_C0000465c24.q1kT7SCF | C0000465C24 | AM065739 |
Chemokine receptor like 2 | 603764351F1 | C0001219F13 | BU444213 |
Chicken cytokine | pat.pk0050.e9.f | C0004737J11 | AI981311 |
CHIR-A | 603478533F1 | C0003884A9 | BU359209 |
CHIR-B | CBst_CHK02000039l03.q1kT7SCF | CHK0200003L3 | AM072078 |
cMGF | pat.pk0060.h1.f | C0004737P22 | AI981598 |
Complement C3 | CBN1_C0000468j22.q1kT7SCF | C0000468J22 | AM066546 |
Complement C4 | 603811612F1 | C0001332G3 | BU376477 |
Complement C7 | 603668434F1 | C0001140D9 | BU416108 |
Complement C8α | 603782386F1 | C000164L21 | BU242118 |
complement H | 603735023F1 | C0001154N6 | BU295434 |
complement receptor 1 | 603819479F1 | C0001351N20 | BU268132 |
Complement1 | CBN2_C0000485f23.q1kT7SCF | C0000485F23 | AM068133 |
Cremp | 603114782F1 | C0003743C21 | BU126768 |
C-type lectin | HFU603551466C18 | C0004763C18 | AM063354 |
CX 3C chemokine receptor 1 | 603949695F1 | C0003852N23 | BU204148 |
CXC-R4 | CTst_C0000878f17.q1kT7SCF | C0000878F17 | AM069849 |
Cytokine like protein 17 | 603773283F1 | C0001242E21 | BU459791 |
Cytokine receptor like 9 | 603472805F1 | C0000591J1 | BU477689 |
Death receptor 6 | CBN1_C0000466l11.q1kT7SCF | C0000467L11 | AM066244 |
DSL-1 | 603321647F1 | C0000418M11 | BU239031 |
EMAP II | 603364164F1 | C0003776P16 | BU475067 |
ephrin type A receptor 2 | 603121949F1 | C0000241A13 | BU133519 |
FAS antigen | 603737578F1 | C0001181L19 | BU300974 |
FASL decoy receptor 3 | CTN2_C0000856k13.q1kT7SCF | C0000856K13 | AM064070 |
GATA-3 | CTN2_C0000858a24.q1kT7SCF | C0000858A24 | AM064179 |
GDF10 | 603530236F1 | C0000994G10 | BU351257 |
GDF8 | 603775823F1 | C0001248N6 | BU458566 |
GDF9 | 603741256F1 | C0001166O13 | BU300398 |
glycoprotein 130 | 603369157F1 | C0002739A15 | BU460413 |
GMCSF | CF258055 | CF258055 | CF258055 |
HCC1 | pat.pk0059.g4.f | pk059g4 | AW061438 |
ICSBP | 603568552F1 | C0001037G14 | BU383423 |
IFNα | 603486811F1 | C0000622F3 | BU319434 |
IFNα/β-R2 | 603783234F1 | C0001268C9 | BU243612 |
IFNγ | 603766180F1 | C0003825O20 | BU444142 |
IFNγR2 | 603606133F1 | C0001120B10 | BU294744 |
IFP35 | 603123028F1 | C0000243H7 | BU135331 |
Ig light chain VJC region | C0000914E7_C03_018.AB1 | C0000914E7 | AM064528 |
Ig heavy chain VDJ region | 603534767F1 | C0002807F18 | BU398082 |
IK cytokine | 603368212F1 | C0000440H3 | BU460192 |
IL-10 | CF258071 | CF258071 | CF258071 |
IL11 receptor | 603402722F1 | C0000518K5 | BU250398 |
IL-12β | 603603708F1 | 603603708F1 | BU291084 |
IL12-p35 | 603761859F1 | C0002846F16 | BU474924 |
IL-13R2 | 603519773F1 | C0000972A19 | BU341330 |
IL-15 | 603102514F1 | C0002655L4 | BU202444 |
IL-16 | 603130176F1 | C0002702H20 | BU114872 |
IL17 receptor | 603211483F1 | C0000350E22 | BU448712 |
IL-18 | 603508766F1 | C0002794D18 | BU271029 |
IL-1β | 603217760F1 | C0003766G15 | BU455380 |
IL-2 | pat.pk022.e2 | pk022e2 | AI980311 |
IL20 receptor | 603591538F1 | C0001088K9 | BU241765 |
IL-2Rα | pat.pk0012.h3 | pk0012h3 | AI980106 |
IL-2Rγ | CBN1_C0000360j15.q1kT7SCF | C0000360J15 | AM064841 |
IL-4 | 603772775F1 | ChEST708f19 | BU450270 |
Il-4R | 603490820F1 | 603490820F1 | BU324362 |
IL-6 | pat.pk0076.f2.f | C0004739G21 | AI982185 |
Interleukin enhancer binding factor 3 | 603322645F1 | C0000420J12 | BU239448 |
IRAK2 | 603831145F1 | ChEST821j11 | BU435261 |
IRAK4 | 603208981F1 | ChEST185a21 | BU441365 |
IRF1 | 603960463F1 | C0002900N15 | BU418343 |
IRF10 | CBN1_C0000360l15.q1kT7SCF | C0000360L15 | AM064884 |
IRF2 | 604146465F1 | C0003862A18 | BU438609 |
IRF3 | CTst_C0000892j09.q1kT7SCF | C0000892J9 | AM070266 |
IRF4 | 6O4_B10_077 | C0000885O4 | AM072251 |
IRF5 | pat.pk0067.c5.f | pk067c5 | AI981854 |
IRF6 | 603111427F1 | C0000188F7 | BU109331 |
JSC | CTst_C0000878m23.q1kT7SCF | C0000878M23 | AM069996 |
K60 | 603470605F1 | C0002774I2 | BU479398 |
lymphotactin | 603733847F1 | C0001151N12 | BU300469 |
MCSF1-receptor | 603220574F1 | C0000383C19 | BU432910 |
MDV vIL-8 | CBst_C0000222p17.q1kT7SCF | C0000222P17 | AM071831 |
MHC class I | CBst_CHK02000039o05.q1kT7SCF | CHK0200003O5 | AM072147 |
MHC class I minor | CTst_C0000873a15.q1kT7SCF | C0000873A15 | AM068728 |
MHC class II beta | HFU603551341A11 | C0004763A11 | AM063247 |
MIF | 604141521F1 | C0001517I5 | BU438017 |
MX | 603775783F1 | C0001248E22 | BU457953 |
NKL | 603539011F1 | C0001016E4 | BU309556 |
N-pac | 604157079F1 | 604157079F1 | BU210048 |
NRAMP1 | pk013p5 | pk013p5 | BI394251 |
NRAMP2 | 603953027F1 | C0001451E8 | BU203948 |
OCIF | 603157972F1 | C0000333O17 | BU410189 |
opioid receptor sigma 1 | 603341826F1 | C0003775C8 | BU254440 |
Orphan chemokine receptor | 603234142F1 | C0000403C12 | BU418544 |
PIT54 | 603150061F1 | C0000313I16 | BU126277 |
platelet activating receptor | pat.pk0002.b12 | C0004739A2 | AI979750 |
PRC1 | 603475588F1 | 603475588F1 | BU355757 |
prostaglandin synthase | CBN1_C0000466j02.q1kT7SCF | C0000467J2 | AM066193 |
Regulator of cytokinesis 1 | 603475588F1 | C0000598P22 | BU355757 |
RING3 | CBst_C0000222p04.q1kT7SCF | C0000222P4 | AM071819 |
SCA-2 | CTN1_C0000853f13.q1kT7SCF | C0000853F13 | AM071100 |
SCYa13 | 603534566F1 | 603534566F1 | BU397023 |
SCYA4 | 603742061F1 | C0001168I15 | BU299262 |
SIGIRR | 603321436F1 | C0002934H10 | BU240159 |
SOCS1 | 603758706F1 | C0003823K20/L1 | BU218362 |
SOCS2 | 603322984F1 | 603322984F1 | BU239208 |
SOCS5 | 603492126F1 | C0000636C7 | BU326390 |
STAT1 | 603957345F1 | ChEST927i11 | BU425993 |
STAT2 | pat.pk0027.a6.f | C0004737C3 | AI980571 |
STAT5b | CBst_C0000222j02.q1kT7SCF | C0000222J2 | AM071688 |
TAP2 | 603732809F1 | C0000758A3 | BU298074 |
Tapasin | CTst_C0000873d22.q1kT7SCF | C0000873D22 | AM068799 |
TARC | pat.pk0031.f10.f | C0004737K13 | AI980713 |
T-bet | pgn1c.pk013.h8 | pgn1cpk013.h8 | CB016768 |
Tcell receptor α | CBst_CHK02000039p10.q1kT7SCF | CHK0200003P10 | AM072172 |
Tcell receptor β | UEB603581072O18 | C0004765O18 | AM063532 |
Tcell receptor γ | CTst_C0000878m08.q1kT7SCF | C0000878M8 | AM069981 |
Tcell receptor ζ | CTst_C0000874j17.q1kT7SCF | C0000874J17 | AM069278 |
TGFβ | 603758578F1 | C0003823K20 | BU215243 |
Thymosin beta 4 | ODP603945810C04 | C0004766C4 | AM063804 |
TLR1/6/10 | 603760940F1 | C0001211O10 | BU471724 |
TLR2 | 603588755F1 | C0001081M13 | BU374739 |
TLR3 | 603781018F1 | C0001261D6 | BU242827 |
TLR4 | 603470778F1 | C0002774L20 | BU475859 |
TLR5 | 603230983F1 | C0000395E22 | BU420247 |
TLR7/8/9 | 603160284F2 | C0002711G22 | BU435893 |
TRAF1 | pat.pk0072.d3.f | C0004738M6 | AI982046 |
TRAF2 | 603217872F1 | C0003766O18 | BU455745 |
TRAF5 | CTst_C0000877n08.q1kT7SCF | C0000877N8 | AM069687 |