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Table 1 Files used to create the local database and URLs of sources of data.

From: Comparison of gene coverage of mouse oligonucleotide microarray platforms

Source Name

URL

File name

NCBI

ftp://ftp.ncbi.nih.gov/gene/DATA

gene_info

gene2accession

gene2refseq

gene_history

gene2unigene

Mm.gb_cid_lid

UCSC

ftp://hgdownload.cse.ucsc.edu/goldenPath/mm7/database/

knownGene

refGene

all_mrna

knownToEnsembl