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Table 1 Files used to create the local database and URLs of sources of data.

From: Comparison of gene coverage of mouse oligonucleotide microarray platforms

Source Name URL File name
NCBI ftp://ftp.ncbi.nih.gov/gene/DATA gene_info
gene2accession
gene2refseq
gene_history
gene2unigene
Mm.gb_cid_lid
UCSC ftp://hgdownload.cse.ucsc.edu/goldenPath/mm7/database/ knownGene
refGene
all_mrna
knownToEnsembl