Table 1 Number of array features and corresponding genes that are differentially expressed in the various comparisons. A false-discovery rate of 0.01 is used, with and without a M-value cut-off of 0.4.
| Â | p < 0.01 (fdr) | p < 0.01 (fdr) and |M| > 0.4 | ||
|---|---|---|---|---|
Comparison | probes | genes | probes | genes |
A (36 vs. 0 h) | 1718 | 1325 | 463 | 365 |
B (72 vs. 0 h) | 2572 | 1936 | 695 | 525 |
C (96 vs. 0 h) | 2562 | 1947 | 699 | 528 |
D (0 h vs. 0 h) | 0 | 0 | 0 | 0 |
HPC1 vs. HPC7 (0 h) | 2580 | 1995 | 646 | 498 |