Table 2 Top 44 genes and their estimated relative transcription levels
From: Operon information improves gene expression estimation for cDNA microarrays
Name | B number | Operon | Verified | Estimated expression | FDR |
|---|---|---|---|---|---|
fliC | B1923 | Â | + | -4.71 | 0.000 |
flgB | B1073 | flgBCDEFGHIJK | + | -3.90 | 0.000 |
flgE | B1076 | flgBCDEFGHIJK | + | -3.82 | 0.000 |
flgL | B1083 | Â | + | -3.81 | 0.000 |
flgF | B1077 | flgBCDEFGHIJK | + | -3.81 | 0.000 |
flgD | B1075 | flgBCDEFGHIJK | + | -3.81 | 0.000 |
flgK | B1082 | flgBCDEFGHIJK | + | -3.76 | 0.000 |
flgI | B1080 | flgBCDEFGHIJK | + | -3.76 | 0.000 |
flgJ | B1081 | flgBCDEFGHIJK | + | -3.75 | 0.000 |
flgH | B1079 | flgBCDEFGHIJK | + | -3.74 | 0.000 |
flgC | B1074 | flgBCDEFGHIJK | + | -3.73 | 0.000 |
flgG | B1078 | flgBCDEFGHIJK | + | -3.71 | 0.000 |
fliA | B1922 | fliAZY | + | -3.44 | 0.000 |
fliY | B1920 | fliAZY | + | -3.35 | 0.000 |
fliZ | B1921 | fliAZY | + | -3.32 | 0.000 |
fliD | B1924 | fliDST | + | -3.30 | 0.000 |
fliS | B1925 | fliDST | + | -3.25 | 0.000 |
fliT | B1926 | fliDST | + | -3.25 | 0.000 |
tap | B1885 | Â | + | -3.22 | 0.000 |
tar | B1886 | Â | + | -2.97 | 0.000 |
tsr | B4355 | Â | + | -2.64 | 0.000 |
fadL | B2344 | Â | - | -2.37 | 0.001 |
fliH | B1940 | fliFGHIJK | + | -2.03 | 0.001 |
fliG | B1939 | fliFGHIJK | + | -2.01 | 0.001 |
fliF | B1938 | fliFGHIJK | + | -1.99 | 0.001 |
fliK | B1943 | fliFGHIJK | + | -1.99 | 0.001 |
fliJ | B1942 | fliFGHIJK | + | -1.92 | 0.000 |
flgA | B1072 | flgAMN | + | -1.91 | 0.001 |
fliI | B1941 | fliFGHIJK | + | -1.89 | 0.001 |
flgM | B1071 | flgAMN | + | -1.87 | 0.001 |
flgN | B1070 | flgAMN | + | -1.81 | 0.001 |
flxA | B1566 | Â | + | -1.70 | 0.002 |
aer | B3072 | Â | + | -1.66 | 0.002 |
cheZ | B1881 | Â | + | -1.63 | 0.002 |
cheR | B1884 | Â | + | -1.60 | 0.003 |
fliM | B1945 | fliMNOPQR | + | -1.55 | 0.003 |
cheY | B1882 | Â | + | -1.51 | 0.005 |
fliL | B1944 | fliMNOPQR | + | -1.50 | 0.005 |
fliN | B1946 | fliMNOPQR | + | -1.49 | 0.005 |
ycgR | B1194 | Â | - | -1.44 | 0.007 |
cheW | B1887 | motAB-cheAW | + | -1.42 | 0.007 |
cheA | B1888 | motAB-cheAW | + | -1.39 | 0.007 |
b1904 | B1904 | Â | - | -1.38 | 0.009 |
mot A | B1890 | motAB-cheAW | + | -1.32 | 0.009 |