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Table 3 SNP list

From: TAMGeS: a Three-Array Method for Genotyping of SNPs by a dual-colour approach

GENE

SNP

ALLELES

LOCATION

NGFB

rs6330

C/T

Exon 1

 

rs3738701

C/A

5'UTR

 

rs11466112

C/T

Exon 1

 

rs11466110

G/A

Exon 1

 

rs11466111

G/A

Exon 1

NTRK1

rs6336

C/T

Exon 15

 

rs6339

G/T

Exon 15

 

rs1799770

A/- (C)

Intron 14

 

rs3753213

G/A

Promoter Region

 

rs1800878

G/T

Intron 2

BDNF

rs6265

G/A

Exon 1

 

X60202

C/T

5'UTR

 

rs1048218

G/T

Exon 1

 

rs1048220

G/T

Exon 1

 

rs1048221

G/T

Exon 1

 

rs3750934

G/A

Intron 1

 

rs8192466

C/T

Exon 1

NTRK2

rs1047856

A/T

Exon 8

 

rs2275857

G/C

Exon 11

 

rs2289656

C/T

Intron 15

 

rs2289658

G/A

Intron 14

NGFR

rs741072

C/T

3'UTR

 

rs2072446

C/T

Exon 4

 

rs2072445

G/T

Intron 3

 

rs734194

T/G

3'UTR

  1. A list of the genotyped SNPs (indicated with their NCBI database rs) is reported, according to the gene they belong to. For each SNP, the polymorphic alleles are indicated, as well as the gene region where they are located. All the SNPs in the exons give non-synonymous amino-acidic change. For the SNP X60202 its GeneBank code is reported.