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Figure 9 | BMC Genomics

Figure 9

From: Putative null distributions corresponding to tests of differential expression in the Golden Spike dataset are intensity dependent

Figure 9

Diagnostic plots applied to the Affymetrix SpikeInSubset dataset. Axes for the top row of plots are as described in Figure 6. Axes for the bottom row of plots are as describes in Figure 7. The relative variability of the expression values appears to be intensity dependent when the data is normalized using RMA. Plots (d), (e), and (f) suggest that the intensity dependence is most notable at the extremes.

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BMC Genomics

ISSN: 1471-2164

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