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Table 1 Genes and p-values for differentially regulated genes.

From: Convergence and divergence in gene expression among natural populations exposed to pollution

Gene

P vs. R

New Bedford Harbor

Newark Bay

Elizabeth River

Nadh-ubiquinone oxidoreductase AGGG subunit precursor

4.00E-10

2.20E-03

3.10E-06

1.00E-03

Adenylyl cyclase-associated protein 2

1.40E-07

0.07

1.80E-05

6.40E-03

Betaine – homocysteine S-methyltransferase

3.70E-06

0.03

4.60E-05

0.06

ADP-ribosylation factor 2

5.10E-06

1.00E-04

0.02

0.31

Cytochrome P450 1B1

6.10E-06

7.00E-04

1.00E-02

0.02

Methylmalonate-semialdehyde dehydrogenase [acylating]

1.40E-05

4.20E-06

1.50E-03

0.91

Alanine aminotransferase

4.80E-05

0.03

9.90E-06

0.72

Inositol Polyphosphate 1-Phosphatase

1.00E-04

1.00E-04

0.03

0.28

Cytochrome P450 2N2

2.00E-04

8.10E-06

3.10E-03

0.58

Elongation factor 1-alpha

3.00E-04

1.00E-02

1.80E-03

0.42

Myo-inositol 1-phosphate synthase A1

3.00E-04

0.21

2.00E-11

0.66

Methylmalonate-semialdehyde dehydrogenase (acylating)

4.00E-04

2.00E-10

0.16

0.68

Aldehyde dehydrogenase family 7 member A1

1.20E-03

0.50

0.03

2.90E-03

NADH dehydrogenase (ubiquinone) flavoprotein 2

1.60E-03

5.30E-03

0.2

0.08

Glutathione peroxidase 2 (gastrointestinal)

1.80E-03

7.00E-04

0.5

0.05

Protein-glutamine gamma-glutamyltransferase

1.80E-03

1.00E-03

0.12

0.77

Calmodulin

2.60E-03

0.10

0.37

1.00E-02

Dihydrolipoamide S-succinyltransferase

2.60E-03

0.37

8.40E-03

0.21

Transaldolase

2.90E-03

1.70E-03

0.46

0.06

Acyl-CoA desaturase

3.50E-03

0.09

0.31

0.03

Acetyl-CoA synthetase

3.70E-03

0.02

0.04

0.62

Glutaminase, kidney isoform, mitochondrial precursor

4.90E-03

0.32

1.00E-02

0.25

Cystathionine-beta-synthase

5.20E-03

0.37

8.60E-03

0.10

3-hydroxyacyl-CoA dehydrogenase type II

7.00E-03

0.46

1.80E-05

0.12

  1. Genes and p-values for differentially regulated genes between all polluted populations versus all reference populations (P vs. R) are contrasted with p-values from separate population comparisons of a polluted population versus two reference populations. One gene (in bold) that is significant between all polluted sites versus all reference sites is also significant in each population comparison. Significant gene values are in bold. Genes above the double line are also significant with a Bonferroni correction.