Table 3 Syntenic blocks between potato annotated genes in the R1- and r1-contigs and sequence related genes of A. thaliana.
Syntenic block | S. tuberosum ORF | A. thaliana ORF (1) | A. thaliana BAC | A. thaliana ORF position (1) [Mbp] | A. thaliana block size | S. tuberosum block size |
|---|---|---|---|---|---|---|
I | ORF17 | At1G14270.1 | F14L17 | 4.875 | 7 kbp | 215 kbp |
| Â | ORF19 | At1G14280.1 | F14L17 | 4.878 | Â | Â |
| Â | ORF43 | At1G14290.1 | F14L17 | 4.880 | Â | Â |
| Â | ORF41 | At1G14300.1 | F14L17 | 4.882 | Â | Â |
II | ORF4 | At1G26880.1 | T2P11 | 9.316 | 18 kbp | 345 kbp |
| Â | ORF5 | At1G26870.1 | T2P11 | 9.313 | Â | Â |
| Â | ORF18 | At1G26850.1 | T2P11 | 9.301 | Â | Â |
| Â | ORF42 | At1G26840.1 | T2P11 | 9.298 | Â | Â |
III | ORF2 | At1G69600.1 | F24J1 | 26.168 | 54 kbp | 405 kbp |
| Â | ORF3 | At1G69610.1 | T6C23 | 26.190 | Â | Â |
| Â | ORF4 | At1G69620.1 | T6C23 | 26.193 | Â | Â |
| Â | ORF43 | At1G69640.1 | T6C23 | 26.197 | Â | Â |
| Â | ORF38 | At1G69690.1 | T6C23 | 26.221 | Â | Â |
| Â | ORF47 | At1G69700.1 | T6C23 | 26.224 | Â | Â |
| Â | ORF48 | At1G69710.1 | T6C23 | 26.226 | Â | Â |
IV | ORF2 | At3G28920.1 | MYI13 | 10.941 | 106 kbp | 25 kbp |
| Â | ORF4 | At3G28900.1 | K5K13 | 10.904 | Â | Â |
| Â | ORF5 | At3G29035.1 | K5K13 | 11.035 | Â | Â |
V | ORF2 | At5G39760.1 | MKM21 | 15.928 | 28 kbp | 25 kbp |
| Â | ORF3 | At5G39785.1 | MKM21 | 15.946 | Â | Â |
| Â | ORF5 | At5G39820.1 | MKM21 | 15.956 | Â | Â |