xthr | xtbs | xthr and xtbs | |
---|---|---|---|
Number of sequences reads obtained | 30272 | 27602 | 57874 |
Number of clone sequences obtained | 16548 | 14901 | 31449 |
Number of valid sequences | 26440 | 22345 | 48785 |
Number of clones with valid sequences | 15540 | 12266 | 27806 |
Number of clones with 5' and 3' EST | 9354 | 11486 | 20840 |
Number of clones with 5' EST only | 4831 | 0 | 4831 |
Number of clones with 3' EST only | 1355 | 780 | 2135 |
Average trimmed EST length | 522 | 546 | 534 |
Number of contigs | 4327 | 4002 | 8756 |
Number of contigs groups | 497 | 289 | 842 |
Number of contigs grouped | 1210 | 649 | 2209 |
Number of unique contigs | 3117 | 3353 | 6547 |
Nulmber of clones in contigs | 9616 | 9268 | 15642 |
Number of singletons | 7958 | 4262 | 17018 |
Number of clones in singletons | 5924 | 2998 | 12164 |
Number of putative transcripts | 9538 | 6640 | 19553 |
Max. assembled sequence length | 3028 | 3144 | 3028 |
Average assembled sequence length | 732 | 782 | 745 |
Max. assembled sequence size | 147 | 144 | 159 |
Average assembled sequence size | 6 | 5 | 5 |
Number of contigs containing | |||
1 | 509 | 97 | 1152 |
2 | 1779 | 2155 | 3730 |
3 | 452 | 362 | 905 |
4–5 | 587 | 545 | 1159 |
6–10 | 505 | 476 | 952 |
11–20 | 283 | 207 | 479 |
21–30 | 91 | 90 | 174 |
31–50 | 80 | 41 | 118 |
50–100 | 31 | 26 | 76 |
>100 | 10 | 3 | 11 |