|  |  | Primer sequence (5' → 3') | Estimated product size | ||
---|---|---|---|---|---|---|
Marker no. | TIGR Rice locus ID | TaEST clone | Forward | Reverse | Os genomic (bp) | Ta EST (bp) |
1 | LOC_Os01g07960 | AY093953 | agtacgggaggacgcatgt | tctgcaggttcggtagacaat | 1128 | 297 |
2 | LOC_Os01g62430 | BT009397 | cttcggcagcgatttccta | gtgaacgtgaggcctactctg | 868 | 353 |
3 | LOC_Os02g01440 | CD453605 | ccaccacagaagcagatgaat | gctagatggcacaccaagtg | 844 | 208 |
4 | LOC_Os02g49780 | CK207954 | aacaagatggcgaggaagaac | agaactcagatgcaggctcaa | 869 | 216 |
5 | LOC_Os03g03510 | CK162308 | gtcaagatcgccaaggacac | gcctccctcaacaaactcaag | 1049 | 213 |
6 | LOC_Os03g48000 | CK158455 | aatgcatgttgaacctcgtgt | tcaaggagatcgatgagcatt | 963 | 156 |
7 | LOC_Os04g08350 | CA486283 | acctcacctcatcactggaaa | attgcttcagcctcctttctc | 1030 | 296 |
8 | LOC_Os04g41910 | CD913720 | gagaggaatgcgtgaagtttg | agaccatctttccggtctttg | 1031 | 106 |
9 | LOC_Os05g01240 | CK162649 | tttccgcttcctatgatgcta | ttcccatctcttgccattaaa | 765 | 340 |
10 | LOC_Os05g28200 | CK168220 | gggatagaactctgggacttca | agtgccagggcataatacagc | 937 | 147 |
11 | LOC_Os06g13680 | CK214580 | ctttagcctccttcgcaacat | tcctcatggttctcaagcact | 1069 | 89 |
12 | LOC_Os06g46450 | CK162440 | tttcacaggaacctctgcatc | tcaacatttgcaggattgtca | 765 | 150 |
13 | LOC_Os07g16960 | CD918004 | acgtgtgcgacttgaagagat | acagcttgctgcttccagaat | 836 | 171 |
14 | LOC_Os07g30840 | DR737909 | cgtgctaactttggctgagtc | gcactcgttgatgaggaaatc | 842 | 108 |
15 | LOC_Os08g05890 | CK206352 | Gccagtttcctcgagatcc | cacagtactgctttgggttgg | 990 | 144 |
16 | LOC_Os08g44000 | CK161204 | gcaatatgcggtgcctatact | cccagccagtctctcacataat | 971 | 207 |
17 | LOC_Os09g04800 | CK162348 | cggctacaataacggtgactc | ctctgctgatctgaaggatgg | 996 | 322 |
18 | LOC_Os09g36450 | CK162719 | Ttcttggtcactctgagcgta | ttgctagctcagcacagtttg | 1007 | 389 |
19 | LOC_Os10g17280 | DN949140 | agccattcacagctcttcttg | aatatgcttcctggagtcacg | 897 | 226 |
20 | LOC_Os10g32880 | CK210932 | tcatcgagcgctacattgag | ttgtcttgctgtgtgaagctg | 1055 | 217 |
21 | LOC_Os11g06340 | CK212529 | acccgttgatcccaagaagta | cggtatcatcagcctcaactc | 923 | 106 |
22 | LOC_Os11g38020 | CA680245 | agcaacactggaggagatatcag | ccattccaaccttatgtatgtca | 880 | 358 |
23 | LOC_Os12g13390 | CK207363 | ctcctcggaaggtctcaagat | tacaacgcttggttgggtatc | 1057 | 237 |
24 | LOC_Os12g35270 | BJ227772 | gctacaacccggcactcat | tggtgcttcttcgacttcttg | 998 | 88 |