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Table 3 Tags mapping to HPV16 genome.

From: Comprehensive serial analysis of gene expression of the cervical transcriptome

Tag

Strand

Gene

N1 tpm

N2 tpm

C1 tpm

C2 tpm

CATGCACGCTTTTTAATTACA

+

E5

0

0

290

1,180

CATGCAACATAAATAAACTTA

+

-

0

0

6

770

CATGGCATTGGACAGGACATA

+

E2

0

0

6

240

CATGTGTATGTATTAAAAATA

-

E5

0

0

6

155

CATGACACAATAGTTACACAA

+

-

0

0

6

125

CATGGGGAGGAATATGATTTA

+

L1/L2

0

0

0

30

CATGTAGACGACACTGCAGTA

-

E2

0

0

0

20

CATGGTAGATTATGGTTTCTG

-

E7

0

0

6

7

CATGTCGTAGGTACTCCTTAA

-

L1/L2

0

0

0

7

CATGGGGATCCTTTGCCCCAG

-

L1/L2

0

0

0

7

CATGATAATATATGTTTGTGC

-

L1/L2

0

0

0

7

CATGCGCCTAGAATGTGCTAT

+

E2

0

0

0

0