From: Genome-wide changes accompanying knockdown of fatty acid synthase in breast cancer
Gene Classication/Description | Symbol | 12 h Fold Δ | 24 h Fold Δ | 36 h Fold Δ | 48 h Fold Δ | Gene Identifier |
---|---|---|---|---|---|---|
Proliferation | Â | Â | Â | Â | Â | Â |
   Up-regulated |  |  |  |  |  |  |
Cell division cycle associated 4 | CDCA4 | 1.43 | 1.63 | 1.82 | 1.59 | GI_22027510-A |
Cyclin G1 | CCNG1 | 0.94 | 1.55 | 1.41 | 1.37 | GI_40805830-S |
Cyclin-dependent kinase 2 | CDK2 | 1.14 | 1.60 | 1.43 | 1.39 | GI_16936529-A |
Cyclin-dependent kinase inhibitor 1A (p21, Cip1) | CDKN1A | 1.60 | 1.60 | 1.84 | 1.82 | GI_17978496-A |
Polo-like kinase 1 | PLK1 | 1.24 | 1.35 | 1.48 | 1.59 | GI_34147632-S |
Sprouty homolog 2 | SPRY2 | 1.39 | 1.68 | 1.60 | 1.58 | GI_22209007-S |
Sprouty homolog 4 | SPRY4 | 1.08 | 1.43 | 1.45 | 1.56 | GI_23308573-S |
Sprouty-related, EVH1 domain containing 1 | SPRED1 | 1.18 | 1.36 | 1.59 | 1.47 | GI_22749220-S |
WEE1 homolog | WEE1 | 1.37 | 1.55 | 1.65 | 1.67 | GI_19718775-S |
Apoptosis | Â | Â | Â | Â | Â | Â |
   Up-regulated |  |  |  |  |  |  |
Annexin A1 | ANXA1 | 1.29 | 1.93 | 1.90 | 1.63 | GI_4502100-S |
Apoptotic protease activating factor | APAF1 | 1.28 | 1.72 | 1.48 | 1.39 | GI_32483362-A |
CSE1 chromosome segregation 1-like | CSE1L | 1.05 | 1.46 | 2.40 | 2.07 | GI_29029560-I |
P21 (CDKN1A)-activated kinase 2 | PAK2 | 1.13 | 1.44 | 1.46 | 1.71 | GI_32483398-S |
Sphingosine-1-phosphate lyase 1 | SGPL1 | 1.42 | 1.55 | 1.67 | 1.72 | GI_31982935-S |
Tumor necrosis factor receptor superfamily, member 10b | TNFRSF10B | 1.32 | 1.81 | 1.76 | 1.49 | GI_22547118-A |
Tumor necrosis factor receptor superfamily, member 21 | TNFRSF21 | 1.20 | 1.71 | 1.88 | 1.73 | GI_23238206-S |
Metabolism | Â | Â | Â | Â | Â | Â |
   Up-regulated |  |  |  |  |  |  |
Insulin induced gene 1 | INSIG1 | 1.51 | 1.51 | 1.56 | 1.51 | GI_38327530-A |
Leptin receptor | LEPR | 1.30 | 1.60 | 1.63 | 1.59 | GI_41327153-S |
Leptin receptor overlapping transcript-like 1 | LEPROTL1 | 1.11 | 1.62 | 1.59 | 1.45 | GI_7662509-S |
Transcription | Â | Â | Â | Â | Â | Â |
   Up-regulated |  |  |  |  |  |  |
E2F transcription factor 7 | E2F7 | 1.26 | 1.32 | 1.50 | 1.47 | GI_44955909-S |
Early growth response 1 | EGR1 | 1.56 | 1.56 | 1.84 | 1.82 | GI_31317226-S |
Far upstream element (FUSE) binding protein 1 | FUBP1 | 1.15 | 1.12 | 1.51 | 1.52 | GI_17402899-S |
FBJ murine osteosarcoma viral oncogene homolog B | FOSB | 1.44 | 1.40 | 1.66 | 1.78 | GI_5803016-S |
FOS-like antigen 1 | FOSL1 | 1.11 | 1.44 | 1.65 | 1.59 | GI_34734076-S |
Kruppel-like factor 4 (gut) | KLF4 | 1.04 | 1.47 | 1.61 | 1.36 | GI_34916057-S |
Meis1, myeloid ecotropic viral integration site 1 homolog | MEIS1 | 1.12 | 1.50 | 1.33 | 1.30 | GI_45006902-S |
Nuclear factor I/A | NFIA | 1.13 | 1.40 | 1.41 | 1.52 | GI_30840979-S |
Nuclear factor I/B | NFIB | 2.10 | 2.24 | 2.29 | 2.16 | GI_5031940-S |
Nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 | NFATC3 | 1.31 | 1.52 | 1.48 | 1.50 | GI_27886558-A |
Paired related homeobox 1 | PRRX1 | 0.96 | 1.35 | 1.59 | 1.59 | GI_12707576-A |
Protein phosphatase 1, regulatory (inhibitor) | ELF2 | 1.30 | 1.34 | 1.54 | 1.41 | GI_42544175-A |
Serum response factor | SRF | 1.55 | 1.44 | 1.35 | 1.26 | GI_4507204-S |
SP110 nuclear body protein | SP110 | 1.02 | 1.25 | 1.33 | 1.63 | GI_17986251-I |
Zinc finger protein 106 homolog | ZFP106 | 1.33 | 1.58 | 1.66 | 1.68 | GI_11968022-S |
Zinc finger protein 267 | ZNF267 | 1.25 | 1.53 | 1.75 | 1.52 | GI_24431954-S |
Zinc finger protein 35 (clone HF.10) | ZNF35 | 1.55 | 1.70 | 1.60 | 1.58 | GI_21361560-S |
Zinc finger protein 426 | ZNF426 | 1.36 | 1.52 | 1.37 | 1.35 | GI_13129115-S |
Zinc finger protein 503 | ZNF503 | 1.28 | 1.53 | 1.37 | 1.28 | GI_34222201-S |
Zinc finger protein 539 | ZNF539 | 1.04 | 1.50 | 1.29 | 1.13 | GI_4758513-S |
Zinc finger protein 559 | ZNF559 | 1.48 | 1.76 | 1.59 | 1.53 | GI_23618925-S |
Zinc finger protein 586 | ZNF586 | 1.73 | 1.63 | 1.63 | 1.51 | GI_8923076-S |
Zinc finger protein 91 homolog | ZFP91 | 1.13 | 1.42 | 1.60 | 1.26 | GI_25777699-I |
   Down-regulated |  |  |  |  |  |  |
Aryl-hydrocarbon receptor nuclear translocator 2 | ARNT2 | 0.85 | 0.79 | 0.62 | 0.76 | GI_41281514-S |
CAMP responsive element binding protein 3-like 4 | CREB3L4 | 0.92 | 0.66 | 0.66 | 0.76 | GI_31542090-S |
Hypothetical protein FLJ37970 | FLJ37970 | 1.08 | 0.79 | 0.81 | 0.67 | GI_40795670-S |
Inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | ID2 | 1.00 | 0.79 | 0.61 | 0.71 | GI_33946335-S |
Inhibitor of DNA binding 3, dominant negative helix-loop-helix protein | ID3 | 0.93 | 0.69 | 0.57 | 0.56 | GI_32171181-S |
Neuronal PAS domain protein 1 | NPAS1 | 0.90 | 0.82 | 0.71 | 0.64 | GI_22027481-S |
Oligodendrocyte transcription factor 1 | OLIG1 | 0.78 | 0.83 | 0.69 | 0.68 | GI_41281694-S |
Signal transducer and activator of transcription 2, 113 kDa | STAT2 | 0.90 | 0.86 | 0.64 | 0.71 | GI_38202247-S |
Ubiquitination | Â | Â | Â | Â | Â | Â |
   Up-regulated |  |  |  |  |  |  |
Ubiquitin-conjugating enzyme E2 variant 1 | UBE2V1 | 1.79 | 2.54 | 2.45 | 2.11 | GI_40806192-S |
Ubiquitin-conjugating enzyme E2 variant 1 | UBE2V1 | 1.65 | 1.73 | 1.83 | 1.67 | GI_40806191-I |
Ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog) | UBE2E3 | 1.62 | 2.21 | 2.27 | 2.14 | GI_33359693-A |
Ubiquitin-conjugating enzyme E2C | UBE2C | 1.09 | 1.11 | 1.52 | 1.25 | GI_32967282-I |
CDC23 (cell division cycle 23, yeast, homolog) | CDC23 | 1.24 | 1.75 | 1.67 | 1.60 | GI_16554575-S |
Ring finger protein 144 | RNF144 | 1.52 | 1.52 | 1.47 | 1.51 | GI_38045937-S |
Makorin, ring finger protein, 1 | MKRN1 | 1.41 | 1.75 | 1.64 | 1.49 | GI_21359891-S |
F-box and leucine-rich repeat protein 12 | FBXL12 | 1.56 | 1.81 | 1.55 | 1.61 | GI_8923178-S |
F-box and leucine-rich repeat protein 7 | FBXL7 | 1.52 | 1.62 | 1.64 | 1.68 | GI_21071079-S |
Ubiquitin-like, containing PHD and RING finger domains, 1 | UHRF1 | 1.15 | 1.55 | 1.36 | 1.35 | GI_16507203-S |
APG12 autophagy 12-like | APG12L | 1.32 | 1.27 | 1.54 | 1.24 | GI_38261968-S |
   Down-regulated |  |  |  |  |  |  |
Membrane-associated ring finger (C3HC4) 2 | MARCH-II | 0.99 | 0.72 | 0.60 | 0.59 | GI_31543081-S |
SH3 domain containing ring finger 2 | SH3RF2 | 1.00 | 0.89 | 0.84 | 0.66 | GI_22749146-S |
Tripartite motif-containing 2 | TRIM2 | 0.78 | 0.83 | 0.60 | 0.76 | GI_15011942-S |
Tripartite motif-containing 37 | TRIM37 | 0.75 | 0.64 | 0.64 | 0.70 | GI_15147332-S |