Normalization of low-density microarray using external spike-in controls: analysis of macrophage cell lines expression profile

Table 5 list of up-regulated genes

Gene name	GeneBank^a)	Description	Fold change^b)	References^c)
Vegfa	NM_009505	Vascular endothelial growth factor A	3.66	[11]
Selenbp1	NM_009150	Selenium binding protein 1	2.98	unpublished
Gna13	NM_010303	Guanine nucleotide binding protein, alpha 13	2.92	unpublished
Anxa4	NM_013471	Annexin A4	2.89	[11]
Bsg	AK002332	Basigin	2.62	[28]
F2r	NM_010169	Coagulation factor II (thrombin) receptor	2.60
P4hb	X06453	Prolyl 4-hydroxylase, beta polypeptide	2.23	[28]
G3pdh	NM_008084	Glyceraldehyde-3-phosphate dehydrogenase	2.07	[29]
Bnip3l	NM_009761	BCL2/adenovirus E1B interact protein 3-like	2.00	[30]
Foxg1	NM_008241	Forkhead box G1	1.97
Ifi204	NM_008329	Interferon-inducible protein p204	1.96
Ctsd	NM_009983	Cathepsin D	1.95	[31]
Btg1	L16846	B-cell translocation gene 1	1.93	[32]
Es10	NM_016903	Esterase 10	1.83	unpublished
Ecm1	NM_007899	Extracellular matrix protein 1	1.79	unpublished
Cxcr4	AB000803	Chemokine (C-X-C motif) receptor 4	1.77	[33]
Il15	NM_008357	Interleukin 15	1.76	unpublished

^a) GeneBank accession number. ^b) The indicated values represent the ratio of hypoxic/normoxic signals (mean of 4 experiments). ^c) Genes validated in published literature or by our unpublished observation using independent mRNA assessment methods.

ISSN: 1471-2164