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Table 7 Mean within-group Euclidean distance of genera for total motif frequency, mean repeat count, and polymorphism in microsatellite loci with one allowed mismatch

From: Patterned sequence in the transcriptome of vascular plants

Group Mean Euclidean distance   
  Total frequency Repeat count Polymorphism
Lower vascular plants: Selaginella, Ceratopteris, Adiantum 229.155 41.982 2.604
Pinaceae: Pinus, Picea, Pseudotsuga 139.117 50.474 7.411
Coniferales: Pinus, Picea, Pseudotsuga, Cryptomeria 131.475** 51.5 6.603
Other gymnosperms: Cycas, Zamia, Gnetum, Welwitschia, Ginkgo 255.205 35.919 3.384
Caryophyllales: Beta, Mesembryanthemum, Tamarix 330.728 44.916 5.173
Rosaceae: Rosa, Prunus, Malus, Fragaria 181.561 46.964 5.931
Fabaceae: Phaseolus, Glycine, Lotus, Medicago, Pisum 252.623 52.162 6.718
Malphigiales: Euphorbia, Manihot, Populus, Bruguiera 287.749 48.202 6.216
Brassicaceae: Brassica, Arabidopsis, Thellungiella 259.861 48.064 6.67
Solanaceae: Solanum, Lycopersicon, Capsicum, Nicotiana, Petunia 128.443*** 45.334 5.81
Lamiales: Sesamum, Salvia, Antirrhinum, Mimulus, Triphysaria 261.175 36.538 3.962
Asteraceae: Helianthus, Stevia, Cichorium, Lactuca, Taraxacum, Zinnia, Gerbera 167.495** 43.556 4.585
Poaceae: Triticum, Hordeum, Secale, Avena, Oryza, Cynodon, Eragrostis, Panicum, Pennisetum, Saccharum, Sorghum, Zea, Lolium, Festuca, Aegilops 403.092 47.223 5.678
Pooideae: Aegilops, Triticum, Secale, Hordeum, Avena, Festuca, Lolium 302.884 45.347 5.808
Triticeae: Aegilops, Triticum, Secale, Hordeum 297.79 47.58 6.977
Panicoideae: Panicum, Pennisetum, Saccharum, Sorghum, Zea 303.835 45.552 5.879
Asparagales: Asparagus, Allium, Lycoris 270.545 35.907 4.317
Other monocots: Acorus, Zantedeschia, Ananas 218.631 37.964 3.657
Group 1: Adiantum, Avena, Ceratopteris, Cycas, Ginkgo, Pseudotsuga 164.376** 35.474 3.313
Group 2: Cryptomeria, Picea, Pinus, Tamarix 165.313 51.348 6.861
Group 3: Amborella, Bruguiera, Eschscholzia, Mesembryanthemum 238.256 39.407 3.454
Group 4: Beta, Brassica, Ipomoea, Juglans, Malus, Saruma 145.794** 46.777 6.325
Group 5: Gnetum, Manihot, Phaseolus, Prunus 184.201 42.602 5.33
Group 6: Aquilegia, Cucumis, Euphorbia, Helianthus, Lactuca, Lotus, Lycopersicon 152.767** 43.374 6.477
Group 7: Nuphar, Panax, Persea, Theobroma 114.516*** 35.681 3.258
Group 8: Liriodendron,Rosa, Sesamum, Thellungiella, Vaccinium 138.397** 33.618 2.432***
Group 9: Arabidopsis, Cynodon, Glycine, Gossypium, Medicago, Populus, Solanum, Vitis 361.635 47.201 7.402
Group 10: Antirrhinum, Cichorium, Gerbera, Pisum, Stevia, Taraxacum, Triphysaria, Zinnia 141.561**** 40.511 3.768
Group 11: Citrus, Lycoris, Mimulus, Poncirus, Zamia 256.198 43.848 5.768
Group 12: Aegilops, Hordeum, Oryza, Panicum, Saccharum, Secale, Sorghum, Triticum, Zea 278.936 42.717 6.583
Group 13: Eragrostis, Festuca, Lolium, Pennisetum 126.825** 42.493 3.569