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Table 8 Mean within-group Euclidean distance of genera for total motif frequency, mean repeat count, and polymorphism in microsatellite loci with two allowed mismatches

From: Patterned sequence in the transcriptome of vascular plants

Group Mean Euclidean distance   
  Total frequency Repeat count Polymorphism
Lower vascular plants: Selaginella, Ceratopteris, Adiantum 36.903 56.8 1.411***
Pinaceae: Pinus, Picea, Pseudotsuga 10.519**** 69.929 7.196
Coniferales: Pinus, Picea, Pseudotsuga, Cryptomeria 14.546*** 67.788 6.506
Other gymnosperms: Cycas, Zamia, Gnetum, Welwitschia, Ginkgo 33.035 50.695 3.059
Caryophyllales: Beta, Mesembryanthemum, Tamarix 67.331 62.875 4.632
Rosaceae: Rosa, Prunus, Malus, Fragaria 39.626 60.01 5.567
Fabaceae: Phaseolus, Glycine, Lotus, Medicago, Pisum 30.364 66.912 6.765
Brassicaceae: Brassica, Arabidopsis, Thellungiella 23.864 59.554 6.267
Malphigiales: Euphorbia, Manihot, Populus, Bruguiera 88.122 67.092 6.054
Solanaceae: Solanum, Lycopersicon, Capsicum, Nicotiana, Petunia 13.763**** 58.708 6.594
Lamiales: Sesamum, Salvia, Antirrhinum, Mimulus, Triphysaria 46.143 48.69 3.589
Asteraceae: Helianthus, Stevia, Cichorium, Lactuca, Taraxacum, Zinnia, Gerbera 25.452** 57.543 4.426
Poaceae: Triticum, Hordeum, Secale, Avena, Oryza, Cynodon, Eragrostis, Panicum, Pennisetum, Saccharum, Sorghum, Zea, Lolium, Festuca, Aegilops 50.746 63.157 5.731
Pooideae: Aegilops, Triticum, Secale, Hordeum, Avena, Festuca, Lolium 43.303 62.033 5.498
Triticeae: Aegilops, Triticum, Secale, Hordeum 49.094 65.451 6.753
Panicoideae: Panicum, Pennisetum, Saccharum, Sorghum, Zea 37.194 60.681 6.531
Asparagales: Asparagus, Allium, Lycoris 42.527 44.446 3.14
Other monocots: Acorus, Zantedeschia, Ananas 131.502 50.358 3.087
Group 1: Amborella, Bruguiera, Eschscholzia, Mesembryanthemum 69.26 54.761 3.502
Group 2: Juglans, Liriodendron, Rosa, Vaccinium 23.313 43.599 3.106
Group 3: Glycine, Populus, Vitis 14.049** 57.31 8.335
Group 4: Brassica, Ipomoea, Saruma 15.270** 60.331 6.408
Group 5: Aquilegia, Arabidopsis, Cucumis, Euphorbia, Lactuca, Medicago, Thellungiella 31.587 62.644 6.379
Group 6: Gerbera, Nuphar, Persea, Prunus, Salvia, Sesamum 24.786** 51.956 3.878
Group 7: Citrus, Hedyotis, Mimulus, Poncirus, Tamarix 30.045 59.185 6.25
Group 8: Solanum, Lycopersicon, Gossypium 17.538** 58.194 8.405
Group 9: Antirrhinum, Beta, Cichorium, Taraxacum 15.427*** 55.703 4.072
Group 10: Allium, Cynodon, Pseudotsuga, Stevia, Triphysaria, Zinnia 42.779 49.258 2.600**
Group 11: Asparagus, Fragaria, Zantedeschia 130.585 45.719 2.757
Group 12: Acorus, Ananas, Eucalyptus, Malus 35.261 61.135 4.616
Group 13: Ginkgo, Lycoris, Panax, Pennisetum, Picea, Zamia 30.553 58.252 4.258
Group 14: Aegilops, Oryza, Panicum, Saccharum, Secale, Sorghum, Zea 31.365 60.619 6.723
Group 15: Festuca, Hordeum, Lolium, Triticum 46.006 63.169 6.435