Skip to main content

Table 8 Mean within-group Euclidean distance of genera for total motif frequency, mean repeat count, and polymorphism in microsatellite loci with two allowed mismatches

From: Patterned sequence in the transcriptome of vascular plants

Group

Mean Euclidean distance

  
 

Total frequency

Repeat count

Polymorphism

Lower vascular plants: Selaginella, Ceratopteris, Adiantum

36.903

56.8

1.411***

Pinaceae: Pinus, Picea, Pseudotsuga

10.519****

69.929

7.196

Coniferales: Pinus, Picea, Pseudotsuga, Cryptomeria

14.546***

67.788

6.506

Other gymnosperms: Cycas, Zamia, Gnetum, Welwitschia, Ginkgo

33.035

50.695

3.059

Caryophyllales: Beta, Mesembryanthemum, Tamarix

67.331

62.875

4.632

Rosaceae: Rosa, Prunus, Malus, Fragaria

39.626

60.01

5.567

Fabaceae: Phaseolus, Glycine, Lotus, Medicago, Pisum

30.364

66.912

6.765

Brassicaceae: Brassica, Arabidopsis, Thellungiella

23.864

59.554

6.267

Malphigiales: Euphorbia, Manihot, Populus, Bruguiera

88.122

67.092

6.054

Solanaceae: Solanum, Lycopersicon, Capsicum, Nicotiana, Petunia

13.763****

58.708

6.594

Lamiales: Sesamum, Salvia, Antirrhinum, Mimulus, Triphysaria

46.143

48.69

3.589

Asteraceae: Helianthus, Stevia, Cichorium, Lactuca, Taraxacum, Zinnia, Gerbera

25.452**

57.543

4.426

Poaceae: Triticum, Hordeum, Secale, Avena, Oryza, Cynodon, Eragrostis, Panicum, Pennisetum, Saccharum, Sorghum, Zea, Lolium, Festuca, Aegilops

50.746

63.157

5.731

Pooideae: Aegilops, Triticum, Secale, Hordeum, Avena, Festuca, Lolium

43.303

62.033

5.498

Triticeae: Aegilops, Triticum, Secale, Hordeum

49.094

65.451

6.753

Panicoideae: Panicum, Pennisetum, Saccharum, Sorghum, Zea

37.194

60.681

6.531

Asparagales: Asparagus, Allium, Lycoris

42.527

44.446

3.14

Other monocots: Acorus, Zantedeschia, Ananas

131.502

50.358

3.087

Group 1: Amborella, Bruguiera, Eschscholzia, Mesembryanthemum

69.26

54.761

3.502

Group 2: Juglans, Liriodendron, Rosa, Vaccinium

23.313

43.599

3.106

Group 3: Glycine, Populus, Vitis

14.049**

57.31

8.335

Group 4: Brassica, Ipomoea, Saruma

15.270**

60.331

6.408

Group 5: Aquilegia, Arabidopsis, Cucumis, Euphorbia, Lactuca, Medicago, Thellungiella

31.587

62.644

6.379

Group 6: Gerbera, Nuphar, Persea, Prunus, Salvia, Sesamum

24.786**

51.956

3.878

Group 7: Citrus, Hedyotis, Mimulus, Poncirus, Tamarix

30.045

59.185

6.25

Group 8: Solanum, Lycopersicon, Gossypium

17.538**

58.194

8.405

Group 9: Antirrhinum, Beta, Cichorium, Taraxacum

15.427***

55.703

4.072

Group 10: Allium, Cynodon, Pseudotsuga, Stevia, Triphysaria, Zinnia

42.779

49.258

2.600**

Group 11: Asparagus, Fragaria, Zantedeschia

130.585

45.719

2.757

Group 12: Acorus, Ananas, Eucalyptus, Malus

35.261

61.135

4.616

Group 13: Ginkgo, Lycoris, Panax, Pennisetum, Picea, Zamia

30.553

58.252

4.258

Group 14: Aegilops, Oryza, Panicum, Saccharum, Secale, Sorghum, Zea

31.365

60.619

6.723

Group 15: Festuca, Hordeum, Lolium, Triticum

46.006

63.169

6.435