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Table 1 G. metallireducens proteins most similar to the benzoyl-CoA pathway proteins from T. aromaticaa

From: Genomic and microarray analysis of aromatics degradation in Geobacter metallireducens and comparison to a Geobacter isolate from a contaminated field site

Benzoyl-CoA pathway protein

closest Gmet ORF

% a.a. ID

name

BclA

Gmet_2143

19

BamY*

BcrA

Gmet_0544

50

Bcra#

BcrB

none

  

BcrC

none

  

BcrD

Gmet_0544

24

Bcra#

Fdx

Gmet_1033

22

 

Dch

Gmet_2150

73

BamR*

Had

Gmet_2151

70

BamQ*

Oah

Gmet_2088

76

BamA*

  1. a Enzymes are benzoate CoA ligase (BclA), benzoyl-CoA reductase (BcrCDAB), ferredoxin (Fdx), cyclohexa-1,5-diene-1-carbonyl-CoA hydratase (Dch), 6-hydroxycylohex-1-en-1-carbonyl-CoA dehydrogenase (Had), and 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase (Oah).
  2. * Gene identified and named by Wishgoll. # Gene identified and named by Hasoda. The cut-off value used for a significant match in the G. metallireducens genome was 0.1.