Inference of transcription modification in long-live yeast strains from their expression profiles

BMC Genomics

Table 1 Significantly enriched motifs with known transcription factors in the up-regulated gene sets

Consensus Sequence	Transcription Factor	sch9Δ/wt		ras2Δ/wt		tor1Δ/wt
		p-value	q-value	p-value	q-value	p-value	q-value
RTGT-YGGRTG	FHL1	1.4E-07	2.1E-05	6.3E-05	0.0011	4.0E-08	9.4E-06
AGGGG	MSN2/MSN4	5.4E-08	1.1E-05	7.6E-05	0.0013	1.3E-07	2.1E-05
AWAGGGAT	GIS1	3.9E-05	9.3E-04	3.1E-04	0.0029	2.5E-05	7.2E-04
ARGGGG	MSN2/MSN4	0.0012	0.0065	0.0096	0.021	1.8E-04	0.0022
RYGWCASWAAW	SUM1	0.28	0.15	9.1E-04	0.0052	6.2E-04	0.0043
GACACAAAA	NDT80	0.0099	0.021	0.0082	0.019	0.0020	0.0084
GY-TSKCACGTG-G	PHO4	0.0039	0.012	2.0E-04	0.0023	0.0059	0.016
A-CACCC-TT	AFT1	0.0020	0.0082	0.0052	0.015	0.014	0.025
AMAA-TGTGG	MET4	0.24	0.14	4.6E-05	0.0010	0.029	0.038
CGCATMCCCCAC	MIG1	0.026	0.036	4.4E-04	0.0037	0.057	0.056
MWGTGTGGCR	MET31	0.046	0.050	7.7E-04	0.0048	0.059	0.058
RRTCACGTG	CBF1	0.59	0.25	2.9E-04	0.0028	0.076	0.067
GAW-TTCTAGAA	HSF1	0.029	0.038	0.0022	0.0090	0.23	0.13
ACCYT-AGGTT	ZAP1	0.13	0.096	1.4E-04	0.0018	0.24	0.14

ISSN: 1471-2164